Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., 2-polyprenylphenol 6-hydroxylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  317 bits (811), Expect = 9e-91
 Identities = 176/449 (39%), Positives = 263/449 (58%), Gaps = 19/449 (4%)

Query: 6   LKRLYRIVKVQLEYGLDELLPEHHLTRAPLLARKSLFWLRNQHADKAL----GDRLRLAL 61
           L RL  I +V   +  D L P   L  A     K   W+    + + +    G++L  A 
Sbjct: 8   LTRLITIARVLARH--DALFPLERLGVA-----KPAVWIAKAASRRNVPGRPGEKLAAAF 60

Query: 62  QELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWF 121
            ELGP +IK GQ +STR DL    +A  L+ LQD + PF     ++ +E EL  PLE+ F
Sbjct: 61  GELGPSFIKLGQALSTRADLMGEEVAADLSNLQDSLPPFPFEDVRRTVETELDRPLESAF 120

Query: 122 DDFDIKPLASASIAQVHTA----KLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVA 177
             FD  P+A+ASIAQVH A      + + R+V +KV+RP +      DI L++ ++R+V 
Sbjct: 121 SVFDPVPVAAASIAQVHFAITAPDAEGHTREVAVKVLRPGVEEAFRRDIDLLFWLSRLVE 180

Query: 178 KALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNE 237
            A P+ RRL+PVE  R +E++++ E+DLR EAA A +L  NF +     VP +       
Sbjct: 181 FAQPQWRRLRPVENARAFEESVVIEMDLRFEAAAACELAENFADDPTFRVPAIDWQRTGR 240

Query: 238 TVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNP 297
            +M  ER+ G+++ +   L A G + ++L     + FF+ VFRD FFHAD+HPGN+FV+ 
Sbjct: 241 RIMTQERVRGLRIDEPDKLIAAGLDPRVLVGNAANAFFSMVFRDGFFHADLHPGNMFVDA 300

Query: 298 NHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDE 357
                   + +D GI+G ++ + +RYL E  L F   +YRR A++H ++GWVP D +V+ 
Sbjct: 301 EGV----LVAVDFGIMGRIDRQTRRYLGEMLLGFLTGNYRRAAEVHFEAGWVPADKSVEG 356

Query: 358 FEVAIRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQ 417
           F  A R + EPI  +PL EIS   +L  LF     F+M+ QPQL+LLQK++L  EG+GR 
Sbjct: 357 FTQACRSIAEPIMGRPLNEISVARLLGQLFQVTETFDMQAQPQLLLLQKSMLVTEGVGRT 416

Query: 418 LYPQLDLWQTAKPFLEKWMANQVGPQAFL 446
           L P +++W+ ++P +E WMA+ +GPQA L
Sbjct: 417 LAPDVNMWELSRPLIESWMADNLGPQARL 445