Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., Abc1 protein (NCBI) from Rhodospirillum rubrum S1H

 Score = 74.7 bits (182), Expect = 7e-18
 Identities = 79/314 (25%), Positives = 130/314 (41%), Gaps = 20/314 (6%)

Query: 54  GDRLRLA--LQEL-----GPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAK 106
           GDR R+A  L+E      GP+ +K  Q+MST  D  P      L  LQ           K
Sbjct: 38  GDRARMASDLREALGGLKGPL-MKVAQIMSTIPDALPQEFTAELTQLQADAPRMGWPFVK 96

Query: 107 QLIEEELGAPLETWFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADI 166
           + +  ELG      F  FD   +A+AS+ QVH A +  +GR +  K+  PD+   ++AD+
Sbjct: 97  RRMTAELGPNWLGRFASFDHDAVAAASLGQVHRA-IHLDGRALACKLQYPDMDSTVEADL 155

Query: 167 KLMYRVARIVAKALPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELY 226
               ++  I+         + P E+  E  + L +ELD  REA N    R    +   ++
Sbjct: 156 S---QLKIIIGLYRRYDGAIDPTEIHAEITERLREELDYAREARNMRLYRHMLRDEAGVH 212

Query: 227 VPEVLTDFCNETVMVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHA 286
           VPE + D   + ++    + G ++  L  ++ +      LA      ++   +     H 
Sbjct: 213 VPEPIADLSTKRLLTMTWLQGERL--LTFINHSPEERNHLAYNMFRAWYVPFYDYGVIHG 270

Query: 287 DMHPGNVFVNPNHPENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDS 346
           D H GN  V  +   N     LD G +        + + + ++A  + D  R   +H   
Sbjct: 271 DPHLGNYTVREDFSVNL----LDFGTIRVFRPVFVQGVIDLYIALRDNDQERA--VHAYD 324

Query: 347 GWVPLDTNVDEFEV 360
            W   D + D   V
Sbjct: 325 CWGFRDLSKDTIAV 338