Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., putative ubiquinone biosynthesis protein UbiB from Phaeobacter inhibens DSM 17395

 Score =  298 bits (763), Expect = 3e-85
 Identities = 162/412 (39%), Positives = 244/412 (59%), Gaps = 5/412 (1%)

Query: 60  ALQELGPVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLET 119
           AL  LGP +IKFGQ++STR D+    +A  L +LQDK+ PF   +A   +E+ELG  ++ 
Sbjct: 64  ALTALGPAYIKFGQVLSTRPDVVGDDLAVQLRVLQDKLPPFSRAEAMTQVEQELGQSVDQ 123

Query: 120 WFDDFDIKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKA 179
            + +F  +P+A+ASIAQVH A+L+   ++V +KV+RP I      D+   Y  ARI    
Sbjct: 124 IYSEFS-EPIAAASIAQVHRARLRDTDQEVAVKVLRPGIERAFRKDVDAFYFAARIADLF 182

Query: 180 LPEARRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETV 239
            P ARRLKP++V++ ++  +  ELDLR E+A A +   N ++ E   +P++L +     V
Sbjct: 183 APGARRLKPMDVIKHFDGVVQGELDLRLESAAASEFAANTKDDEGFQLPQILWNHSARRV 242

Query: 240 MVSERIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNH 299
           M      G+ + D A L A G +  +LAER +S+F     RD +FHADMH GN+ V    
Sbjct: 243 MTLGWADGLPLGDNAALDAAGHDRTVLAERVLSLFLRHALRDGYFHADMHQGNLKV---- 298

Query: 300 PENPQWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEFE 359
             N   I  D GI+G ++   +R  AE    F  RDY+RVA++H ++G+VP D +VDEF 
Sbjct: 299 AANGDIIAYDFGIMGHIDEYTRRVYAEILFGFIKRDYKRVAEVHFEAGYVPADRDVDEFA 358

Query: 360 VAIRMVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLY 419
            A+R V EPIF      IS G +L  LF    RF ME + +L+LLQ+T++ VEG+ R L 
Sbjct: 359 RALRAVGEPIFGMDATHISMGRLLNYLFEVTERFGMETRTELILLQRTMVVVEGVARSLD 418

Query: 420 PQLDLWQTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSL 471
           P +++W +A+P +E ++   +GP+A ++ L   A +     P LP L+  +L
Sbjct: 419 PHINIWDSARPVVEDYIKKSIGPRAVVNDLMSTAKVMARFGPRLPALVEQAL 470