Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., 2-polyprenylphenol 6-hydroxylase (RefSeq) from Shewanella loihica PV-4

 Score =  631 bits (1627), Expect = 0.0
 Identities = 313/537 (58%), Positives = 397/537 (73%), Gaps = 1/537 (0%)

Query: 6   LKRLYRIVKVQLEYGLDELLPEHHLTRAPLLARKSLFWLRNQHADKALGDRLRLALQELG 65
           ++R Y++VK  L+YGLD+L+P         L R S FWL NQH DK  G+RL+LA+QELG
Sbjct: 6   MRRAYQVVKTVLQYGLDDLIPAKLKPWYFRLLRWSFFWLTNQHKDKVGGERLKLAMQELG 65

Query: 66  PVWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFD 125
           PV+IKFGQM+STRRDL     A+ LAMLQD+V PFD   A+  IE ELGAP+ET+FD+FD
Sbjct: 66  PVYIKFGQMLSTRRDLLSDEWAEELAMLQDRVPPFDSAIARAQIEAELGAPIETYFDNFD 125

Query: 126 IKPLASASIAQVHTAKLKSNGRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKALPEARR 185
             PLASASI+QVHTA LKSNG +VVLKV+RP++  ++ AD+ LM + A+++   L    R
Sbjct: 126 DTPLASASISQVHTATLKSNGEEVVLKVLRPNVEEKVHADLLLMTQSAQVLETLLGHGNR 185

Query: 186 LKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSERI 245
           L+P EVV +Y  T+  EL+L+ EA NAI+LR NF +S  LY+P++  +FC   ++V ERI
Sbjct: 186 LRPAEVVEDYRTTIEGELNLKLEALNAIKLRNNFIDSGALYIPKMYEEFCFTRLIVMERI 245

Query: 246 YGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENPQW 305
           YG+ VSD A L A GTN+KLLAERGV +FFTQVFRD+FFHADMHPGN+FV+  HPE+P +
Sbjct: 246 YGVPVSDRAALEAQGTNLKLLAERGVELFFTQVFRDNFFHADMHPGNIFVSTEHPEDPFY 305

Query: 306 IGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEFEVAIRMV 365
           IGLDCGI+GTL  +DKRYLAENFLAFFNRDY R+AQL+++SGWV  DT++  FE AI++V
Sbjct: 306 IGLDCGIMGTLTEQDKRYLAENFLAFFNRDYTRIAQLYIESGWVAADTDLVAFEQAIKVV 365

Query: 366 CEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQLDLW 425
           CEP+F KPL EISFGHVLL LF TARRF+M VQPQLVLL+KTLLY+EGLGRQLYPQLDLW
Sbjct: 366 CEPMFNKPLDEISFGHVLLELFRTARRFDMVVQPQLVLLEKTLLYIEGLGRQLYPQLDLW 425

Query: 426 QTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSLKQGRNLNQRLDNLY 485
           QTAKPFLE WMA Q+GP      +K++ P W +K+PELPEL+YD+LK G+N     + L 
Sbjct: 426 QTAKPFLESWMAEQMGPLGMAKKIKKQFPYWTDKLPELPELVYDNLKMGKNFVNSQNQLL 485

Query: 486 QGYRQSKRQQGTGKFLFGVGATLVVCSAIWIS-NQLEPLAIGSATIGVLCWLLSWRA 541
             Y + +++     +L    A LV+C +I  S N     +     IG   WLL WR+
Sbjct: 486 DRYLKQQQKAHKSNYLLITSAVLVICGSILFSQNATLWASYACIGIGATLWLLGWRS 542