Pairwise Alignments

Query, 544 a.a., ubiquinone biosynthesis protein UbiB from Vibrio cholerae E7946 ATCC 55056

Subject, 525 a.a., hypothetical protein from Burkholderia phytofirmans PsJN

 Score =  470 bits (1209), Expect = e-137
 Identities = 256/516 (49%), Positives = 342/516 (66%), Gaps = 13/516 (2%)

Query: 8   RLYRIVKVQLEYGLDEL-LPEHHLTRAPLLARKSLFWLRNQHADKALGDRLRLALQELGP 66
           R  +I    + +GLDE+ L   +  R  LL R +      +  D   G RLRLAL+ LGP
Sbjct: 5   RFLKIFFTVIRFGLDEMMLSRVNDRRVRLLLRITTI---GRKFDAPPGVRLRLALESLGP 61

Query: 67  VWIKFGQMMSTRRDLFPPHIADPLAMLQDKVAPFDGLQAKQLIEEELGAPLETWFDDFDI 126
           +++KFGQ++STRRDL P  IAD LA LQD+V PF+   A +L+E  LGAP++  FDDF+ 
Sbjct: 62  IFVKFGQVLSTRRDLLPVDIADELAKLQDQVPPFESAVAIRLVENALGAPVDVLFDDFER 121

Query: 127 KPLASASIAQVHTAKLKSN---GRDVVLKVIRPDIRPQIDADIKLMYRVARIVAKALPEA 183
            P+ASASIAQVH A +K+    G+ V +KV+RP++ P ID+D+ L+  +A    +   + 
Sbjct: 122 VPVASASIAQVHFATVKAGQHAGKAVAVKVLRPNMLPVIDSDLALLRDIAVWAERLWADG 181

Query: 184 RRLKPVEVVREYEKTLLDELDLRREAANAIQLRRNFENSEELYVPEVLTDFCNETVMVSE 243
           +RLKP EVV E++K L DELDL REAAN  QLRRNF   + L VPE+  +FC  TV+V E
Sbjct: 182 KRLKPREVVAEFDKYLHDELDLMREAANGSQLRRNFAGLDLLLVPEMYWEFCTPTVLVME 241

Query: 244 RIYGIQVSDLAGLHANGTNMKLLAERGVSVFFTQVFRDSFFHADMHPGNVFVNPNHPENP 303
           R+ G+ +S +  L A G ++  LA  GV +FFTQVFRD FFHADMHPGN+ V+ +     
Sbjct: 242 RMVGVPISQVETLRAAGVDIPKLAREGVEIFFTQVFRDGFFHADMHPGNIQVSLDPAHFG 301

Query: 304 QWIGLDCGIVGTLNSEDKRYLAENFLAFFNRDYRRVAQLHVDSGWVPLDTNVDEFEVAIR 363
           ++I LD GI+G L+  DK YLA+NFLAFF RDY RVA LH++SGWVP  T V+E E AIR
Sbjct: 302 RYIALDFGIIGALSDFDKNYLAQNFLAFFKRDYHRVATLHLESGWVPPTTRVEELESAIR 361

Query: 364 MVCEPIFAKPLCEISFGHVLLNLFNTARRFNMEVQPQLVLLQKTLLYVEGLGRQLYPQLD 423
            VCEP F + L +IS G VL+ LF+T+RRFN+E+QPQLVLLQKT+L VEGLGR L P+LD
Sbjct: 362 AVCEPYFDRALKDISLGQVLMRLFSTSRRFNVEIQPQLVLLQKTMLNVEGLGRSLDPELD 421

Query: 424 LWQTAKPFLEKWMANQVGPQAFLHALKERAPLWFEKMPELPELLYDSL------KQGRNL 477
           LW+TAKP+LE+WM  Q+G + +   LK  AP W + +P+LP L++ +L      K+G N 
Sbjct: 422 LWKTAKPYLERWMNEQIGLRGWYERLKIEAPQWSKTLPQLPRLIHHALAERHDNKRGAND 481

Query: 478 NQRLDNLYQGYRQSKRQQGTGKFLFGVGATLVVCSA 513
           +     L +  R ++  QG   F   VG   V+  A
Sbjct: 482 DMIRQILLEQKRTNRLLQGLLLFGVAVGVGAVLARA 517