Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., DNA recombination protein RmuC from Pseudomonas fluorescens FW300-N2E2

 Score =  372 bits (956), Expect = e-107
 Identities = 204/492 (41%), Positives = 311/492 (63%), Gaps = 19/492 (3%)

Query: 9   SALWSALVSAGATGVAIGWWVKQRY---QLKTQLLEQQLEQQSHWHAQQIQQLNEQLTTA 65
           ++L   L  A    +A+ W ++++    Q +  LLE++L      H      LN QL   
Sbjct: 4   TSLLFGLAGAAVPLLALAWHLQRQAAAAQTEQALLEERLATAHMAH----DGLNAQLDAC 59

Query: 66  QQELDELDALRDKNEFELKQSHGKL-MAVLEKLRYFEAVKQ---ERQQYADELNQVRAAK 121
           + E+ +L       + EL  +  ++ +  +E+    +A      ER     EL ++ A  
Sbjct: 60  RDEISDLSQANAAKQAELAAACREVELLQIERDNARDAAHAWNLERANKEAELRRLDAQA 119

Query: 122 AELESQLREQEARHQQQLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQ 181
           A L ++LREQ+  HQQ       +L  L+ + + L+ QF  LA ++F+ +       ++Q
Sbjct: 120 ASLHAELREQQESHQQ-------RLDDLQGSRDELRAQFAELAGKIFDEREQRFAETSQQ 172

Query: 182 SLEGLLTPLKEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALK 241
            L  LL PLKE+++ F+K+V +S+  EA+ER +L  EL  LQ+LN +++ EA NLT+ALK
Sbjct: 173 RLGQLLDPLKERIQSFEKRVEESYQAEARERFSLGKELERLQQLNLRLSDEATNLTRALK 232

Query: 242 GDNKQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVID 301
           G  K QGNWGE++L RVL  +GL +G EYQTQVSL+   G+R+QPDV+++LP +KQVV+D
Sbjct: 233 GQ-KTQGNWGELILERVLEHAGLEKGREYQTQVSLKGPDGERFQPDVLIYLPGDKQVVVD 291

Query: 302 SKMALVAYERYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIP 361
           SK++L AY++Y  AE D+    AL++H+ +LR H++GL  KDY +L G+ SLD+VL+F+P
Sbjct: 292 SKVSLTAYQQYVAAEDDAIGQHALKQHVASLRAHVKGLAGKDYKRLDGLHSLDFVLLFVP 351

Query: 362 VEPAFQVAIQADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERAS 421
           +E AF  A+QA+P+L  +A ++NI++VSPTTLL  LR ID+LW+ ERQ+QNA+ IAERA 
Sbjct: 352 IEAAFSAALQAEPNLFQEAFDRNIVIVSPTTLLATLRVIDSLWKQERQSQNAREIAERAG 411

Query: 422 KLYDKLRLFVEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIP 481
            LYDK  LF++D++ +G  L + +++Y  A NKL  GRGN I ++E  K LG    +S+P
Sbjct: 412 WLYDKFVLFIQDLDEIGSRLQQLDKAYSAARNKLTEGRGNLISRSEQLKLLGARASKSLP 471

Query: 482 QPLIERAQQAPD 493
             L+ERA    D
Sbjct: 472 ADLLERAMTDAD 483