Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 520 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  422 bits (1086), Expect = e-122
 Identities = 227/465 (48%), Positives = 316/465 (67%), Gaps = 22/465 (4%)

Query: 40  LEQQLEQQSHWH---AQQIQQLNEQLTTAQQELDE----LDALRDKNEF------ELKQS 86
           L  Q+  +  W    A +I+Q    +   + +LDE    LD   D+  F      E+ Q 
Sbjct: 28  LINQILTRKRWESLDALRIEQHQAAICALESQLDEHKNQLDDKEDRLSFFQNRIEEVSQR 87

Query: 87  HGKLMAVLEKLRYFEAVKQERQQYADELNQVRAAKAELESQLREQE---ARHQQQLVASQ 143
           +G+  A  ++L   E      Q+ AD   Q+  A+ E    +  Q+   A+   +  A +
Sbjct: 88  YGEAKAEAQRLPELE------QKLADTHRQLMEARLETAKAIAMQQSISAKFDAERQAFE 141

Query: 144 EKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQSLEGLLTPLKEQLEGFKKQVND 203
           EKL LLE AE RLK QFE+LAN++FE +   +  QN   L+ ++ PLK+Q++GF+KQVN+
Sbjct: 142 EKLALLESAEARLKLQFENLANKIFEQRAEQLKGQNLLQLDAVIGPLKQQIDGFRKQVNE 201

Query: 204 SFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALKGDNKQQGNWGEVVLARVLAESG 263
           S++ E  ER +L H+L  L  LN +M+++A+NLT ALKGDNKQQGNWGEV+L RVL+ESG
Sbjct: 202 SYSIEQAERSSLKHQLEQLASLNVKMSQDAINLTNALKGDNKQQGNWGEVILERVLSESG 261

Query: 264 LREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVIDSKMALVAYERYFHAETDSERDS 323
           LREGHEY TQ  L+ E G++++PDVIVHLP  K VVID+KM+L AYERYF+A  D+++  
Sbjct: 262 LREGHEYHTQQELKAENGQKFKPDVIVHLPGEKDVVIDAKMSLTAYERYFNASEDADKAQ 321

Query: 324 ALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEPAFQVAIQADPSLVNDAMEQ 383
           AL+EH+L++R+HI+ L QKDY  L G+++LDYVLMFIPVEPAF +A++ +P LV  A+E 
Sbjct: 322 ALKEHVLSVRSHIKLLSQKDYQHLHGLKTLDYVLMFIPVEPAFLLALEQEPGLVGYALEH 381

Query: 384 NIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERASKLYDKLRLFVEDMEGLGGALDK 443
           NI+L SPT LLVALRTI N+WR E QN +AQ IA+ A K+YDKL ++V++M+ LG +LD 
Sbjct: 382 NIMLASPTNLLVALRTIHNIWRYEYQNLHAQHIAKAAGKIYDKLCIYVDEMDKLGRSLDT 441

Query: 444 ANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIPQPLIERA 488
           A +S+Q AM KL TGRGN IRQA   +QLGVE  + + + L++ A
Sbjct: 442 AQKSFQSAMGKLSTGRGNLIRQAHQMRQLGVESSKQLDKQLLDNA 486