Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 509 a.a., DNA recombination protein RmuC from Rhodanobacter denitrificans MT42

 Score =  262 bits (669), Expect = 2e-74
 Identities = 141/382 (36%), Positives = 229/382 (59%), Gaps = 5/382 (1%)

Query: 122 AELESQLREQEARHQQQLVASQEK----LQLLERAEERLKQQFEHLANQVFEHKTATVDV 177
           AE +S L E +AR +Q++ +++++     +LL  A+E + ++F+ +A+ + E K A ++ 
Sbjct: 113 AEEKSALLESQARLEQEVKSARQREIDTSKLLTDAKEEMAKEFKLMASTLLEEKGARLNE 172

Query: 178 QNRQSLEGLLTPLKEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLT 237
           Q + +L  LL P  + L+ FK +V  +   +   R  L+ ++R+L  LN+ +  +A +LT
Sbjct: 173 QQKVTLSNLLGPFSKTLDDFKGKVEATREADLAAREGLIAQIRHLTELNQDIGAKAQSLT 232

Query: 238 QALKGDNKQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNE-AGKRYQPDVIVHLPQNK 296
            AL+G++K +G WGE VL R+L  +GLREG E++TQ S   E A  R  PDV++ LPQ +
Sbjct: 233 NALRGESKTRGMWGEAVLQRILELAGLREGIEFRTQASHHTEEADGRLIPDVVLDLPQER 292

Query: 297 QVVIDSKMALVAYERYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYV 356
            +VID+K++LVAYER+  +  D  R  AL +H  +++ HI+ L  K+Y  L  ++S+D+ 
Sbjct: 293 AIVIDAKVSLVAYERFVSSADDDARTMALDDHSTSIKRHIKDLSSKNYPSLYNLKSVDFT 352

Query: 357 LMFIPVEPAFQVAIQADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLI 416
           L+F+P+E A   A +ADP L   A+E+++ LVSP TL   LRTI+ +WR ++   + + I
Sbjct: 353 LLFVPIESALMAASEADPGLAQYALERHVALVSPNTLFTVLRTIEYIWRVDKTTHSMEEI 412

Query: 417 AERASKLYDKLRLFVEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEI 476
            +R   +YD    F E +  +G AL KA  + Q A   LV  R   +RQAE  + LG++ 
Sbjct: 413 VKRGGLMYDAAVRFSEHVVSIGDALAKATVATQAAEKALVNPRSGLVRQAEQLRDLGIKP 472

Query: 477 KRSIPQPLIERAQQAPDQENAP 498
           KRS+P+ L          E  P
Sbjct: 473 KRSMPKKLSSAGDDLEPAEKFP 494