Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., DNA recombination protein RmuC from Pseudomonas fluorescens SBW25-INTG

 Score =  366 bits (940), Expect = e-106
 Identities = 205/497 (41%), Positives = 314/497 (63%), Gaps = 41/497 (8%)

Query: 15  LVSAGATGVAIGWWVKQRYQLKT---QLLEQQLEQQSHWHAQQIQQLNEQLTTAQQELDE 71
           L  A    +A+ W +++R   +    +LLE++L          I QL ++   AQ     
Sbjct: 12  LAGAAVPLLALCWQLQRRLTARMTGWELLEERLA---------IAQLAQEGLAAQ----- 57

Query: 72  LDALRDKNEFELKQSHGKLMAVLEKLRY-FEAVKQERQQYAD--------------ELNQ 116
           LDA RD+   +L Q++    A L  +R   E ++ +R    D              EL +
Sbjct: 58  LDASRDEIS-DLSQANAAKQADLAAVRREVELLQIDRDNARDAAHAWNLDRSAKEAELRR 116

Query: 117 VRAAKAELESQLREQEARHQQQLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVD 176
           + A  + L ++LREQ+  HQQ       +L  L+ + + L+ QF  LA ++F+ +     
Sbjct: 117 LDALSSALRAELREQQDSHQQ-------RLNDLQGSRDELRAQFAELAGKIFDEREQRFA 169

Query: 177 VQNRQSLEGLLTPLKEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNL 236
             +++ L  LL PLKE+++ F+K+V +S+ +EA+ER +L  EL  LQ+LN +++ EA NL
Sbjct: 170 ETSQERLGQLLDPLKERIQSFEKRVEESYQNEARERFSLAKELERLQQLNLRLSDEATNL 229

Query: 237 TQALKGDNKQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNK 296
           T+ALKG  K QGNWGE++L RVL  +GL +G EYQTQVSL+   G+R+QPDV++ LP +K
Sbjct: 230 TRALKGQ-KTQGNWGELILERVLEHAGLEKGREYQTQVSLKGPDGERFQPDVLIMLPGDK 288

Query: 297 QVVIDSKMALVAYERYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYV 356
           QVV+DSK++L AY++Y  AE D    +AL++H+L+LRNH++GL  KDY +L+G+ SLD+V
Sbjct: 289 QVVVDSKVSLTAYQQYVAAEDDVIGQAALKQHVLSLRNHVKGLAGKDYKRLEGLHSLDFV 348

Query: 357 LMFIPVEPAFQVAIQADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLI 416
           L+F+P+E AF  A+QA+P+L  +A +++I++VSPTTLL  LR ID+LW+ ERQ+QNA+ I
Sbjct: 349 LLFVPIEAAFSAALQAEPNLFQEAFDRHIVIVSPTTLLATLRVIDSLWKQERQSQNAREI 408

Query: 417 AERASKLYDKLRLFVEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEI 476
           AERA  LYDK  LF++D++ +G  L + +++Y  A NKL  GRGN + + E  + LG   
Sbjct: 409 AERAGWLYDKFVLFIQDLDEVGNRLQQLDKAYSAARNKLTDGRGNLVSRTEQLRLLGARA 468

Query: 477 KRSIPQPLIERAQQAPD 493
            +S+P  L+ERA    D
Sbjct: 469 SKSLPADLLERAMTDSD 485