Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 491 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  429 bits (1104), Expect = e-125
 Identities = 225/457 (49%), Positives = 322/457 (70%), Gaps = 12/457 (2%)

Query: 39  LLEQQLEQQSHWHAQQIQQLNEQLTTAQQELDELDALRDKNEFELKQSHGKLMAVLEKLR 98
           LL Q+L + S W   + ++L ++ TTA   +  L+A  ++   ++ Q + KL   +  L 
Sbjct: 28  LLNQRLTR-SKWQRVR-EELIQEHTTA---IALLEASLEEKRSDVAQLNQKLEHQINLLG 82

Query: 99  YFEAVKQERQQYADELNQVRAAKAELESQLREQEARHQQQLV-------ASQEKLQLLER 151
             +A  Q       +L Q +  + E +  L +  A  Q   V       A ++K++ L  
Sbjct: 83  MSQAQAQRADDLEQQLQQSQRKQMETQLALSKSNAIQQTLTVKFETEQQALEDKIKHLHE 142

Query: 152 AEERLKQQFEHLANQVFEHKTATVDVQNRQSLEGLLTPLKEQLEGFKKQVNDSFNHEAKE 211
           +E RL QQFE+LAN++F+ K   +  ++ Q L  +L+P K+QLEGF+KQV +S+  E  E
Sbjct: 143 SETRLTQQFENLANKIFDAKAQRLQHESEQQLSNVLSPFKQQLEGFRKQVQESYTVEQNE 202

Query: 212 RHTLVHELRNLQRLNEQMAKEAVNLTQALKGDNKQQGNWGEVVLARVLAESGLREGHEYQ 271
           R  L H+L +L+ LN QM+++A+NLT+ALKGDNKQQGNWGEV+L RVL ESGLREGHEY+
Sbjct: 203 RSALKHQLESLKALNLQMSQDAINLTKALKGDNKQQGNWGEVILERVLQESGLREGHEYE 262

Query: 272 TQVSLQNEAGKRYQPDVIVHLPQNKQVVIDSKMALVAYERYFHAETDSERDSALREHLLA 331
           TQ  L+++ GKR++PDVIVHLP+NK VVID+KM+LVAYERYF++E ++ + +A++EH L+
Sbjct: 263 TQQDLKHDNGKRFKPDVIVHLPENKDVVIDAKMSLVAYERYFNSEDETVKAAAIKEHCLS 322

Query: 332 LRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEPAFQVAIQADPSLVNDAMEQNIILVSPT 391
           +RNHI+GL QKDY  L G+ SLDYVLMFIP+EPAF +A++ +PSL+N A+E NI+LVSPT
Sbjct: 323 IRNHIKGLSQKDYQALHGLTSLDYVLMFIPLEPAFLLALEHEPSLINYALENNIMLVSPT 382

Query: 392 TLLVALRTIDNLWRNERQNQNAQLIAERASKLYDKLRLFVEDMEGLGGALDKANQSYQGA 451
            LLVALRTI+N+WR E QNQNAQLIA++A K+YDKL  ++EDME +G A++  ++ YQ A
Sbjct: 383 NLLVALRTINNIWRYEYQNQNAQLIAKQAGKIYDKLCGYLEDMEKIGRAVESLDKHYQAA 442

Query: 452 MNKLVTGRGNAIRQAESFKQLGVEIKRSIPQPLIERA 488
           M KL TG+GN IRQA   +Q+GV   + +   L+++A
Sbjct: 443 MGKLSTGKGNLIRQAHQMQQMGVTTNKQLDNQLLDKA 479