Pairwise Alignments

Query, 510 a.a., DNA recombination protein RmuC from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  460 bits (1183), Expect = e-134
 Identities = 244/494 (49%), Positives = 350/494 (70%), Gaps = 23/494 (4%)

Query: 15  LVSAGATGVAIGWWVKQRY-QLKTQLLEQQLEQQSHWHAQQIQQLNE--QLTTAQQELDE 71
           L++    G+ IG  + QR  + + Q  + +LEQ+       ++Q+NE  +L+ AQQ++  
Sbjct: 15  LLAVAFLGLLIGALLNQRLTRSRWQQFKDELEQE-------MRQVNEDAELSLAQQQV-- 65

Query: 72  LDALRDKNEFELKQSHGKLMAVLEKLRYFEAVKQERQQYADELNQVRAAKAELESQLREQ 131
              L D  + +L+Q   +L   +E+L   EA+ +       +L      + EL+  L + 
Sbjct: 66  ---LVDDKDNQLRQCQQRLEQKIEQLGKAEAMAERLPSIEQQLADSHRRQLELQLALSKS 122

Query: 132 EARHQQ-------QLVASQEKLQLLERAEERLKQQFEHLANQVFEHKTATVDVQNRQSLE 184
            A  Q        Q  A QEK+  LE AE RL+ QFE+LAN++FE ++ +   QN   LE
Sbjct: 123 NAMQQTIQAKADAQQSAMQEKIATLEMAEVRLQTQFENLANRIFEERSESFKHQNANQLE 182

Query: 185 GLLTPLKEQLEGFKKQVNDSFNHEAKERHTLVHELRNLQRLNEQMAKEAVNLTQALKGDN 244
           G+L PLK+QLEGF++Q+ +S+NHE  ER  L H+L +L+ LN +M+++A+NLT+ALKGDN
Sbjct: 183 GVLGPLKQQLEGFRQQIRESYNHEQSERSALKHQLEHLRELNLKMSQDAINLTKALKGDN 242

Query: 245 KQQGNWGEVVLARVLAESGLREGHEYQTQVSLQNEAGKRYQPDVIVHLPQNKQVVIDSKM 304
           KQQGNWGEV+L RVL ESGLREGHEY TQ  L++++GKR++PDVIVHLP+NK VVID+KM
Sbjct: 243 KQQGNWGEVILDRVLQESGLREGHEYHTQQDLKDDSGKRFKPDVIVHLPENKDVVIDAKM 302

Query: 305 ALVAYERYFHAETDSERDSALREHLLALRNHIRGLGQKDYHQLKGIQSLDYVLMFIPVEP 364
           +L++YERYF++E    R+ A+ EH+L++RNHI+GL QKDY +L G++SLDYVLMFIP+EP
Sbjct: 303 SLISYERYFNSEDPLVREQAINEHVLSIRNHIKGLSQKDYQRLHGLKSLDYVLMFIPIEP 362

Query: 365 AFQVAIQADPSLVNDAMEQNIILVSPTTLLVALRTIDNLWRNERQNQNAQLIAERASKLY 424
           AF +A++ DPSLVN A+EQNI+LVSPT LLVALRTI+N+WR E QNQ+AQ IA++A ++Y
Sbjct: 363 AFLLALEHDPSLVNFALEQNIMLVSPTNLLVALRTINNIWRYEYQNQHAQTIAKQAGRIY 422

Query: 425 DKLRLFVEDMEGLGGALDKANQSYQGAMNKLVTGRGNAIRQAESFKQLGVEIKRSIPQPL 484
           DKL  +++DME LG ALD A ++Y  AMNKL +G+GN +RQA   +QLGV+  + + + L
Sbjct: 423 DKLCGYLDDMEKLGRALDNAEKTYHSAMNKLSSGKGNLVRQAHLMQQLGVDTSKQLDKML 482

Query: 485 IERA-QQAPDQENA 497
           +E+A  +A D+ +A
Sbjct: 483 LEKALNEALDESDA 496