Pairwise Alignments

Query, 303 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  272 bits (696), Expect = 6e-78
 Identities = 148/288 (51%), Positives = 195/288 (67%), Gaps = 3/288 (1%)

Query: 2   NEKRALSLGLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKLI 61
           +  +A    LA++LLWSTVATAFKL L+   PLQ+V VA   S +AL VI AA  KL LI
Sbjct: 3   SSNQAYLYALAAILLWSTVATAFKLALSHFTPLQLVFVAVSTSIVALGVILAATGKLHLI 62

Query: 62  VPTLLANPFYYLLLGLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFLGQR 121
                + P++YL  GL+NP  YYL+LFKAY+LLPA QA ++NY+WAI L L+A   L Q+
Sbjct: 63  KRQFASRPWFYLQTGLLNPFLYYLVLFKAYALLPAQQALSLNYTWAILLPLLAVPLLKQK 122

Query: 122 IRKQDWIACAMSYLGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNKADP 181
           +RK D  A  ++YLGV VIAT G++  ++FES  GV LAL STLLW+ YWI+NTK++ DP
Sbjct: 123 LRKSDLTAALVAYLGVFVIATNGEVASVRFESATGVLLALTSTLLWSLYWIVNTKDEGDP 182

Query: 182 IVGVLLGFLLAIPFAL-ALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALKNT 240
           +V +LL FL+ +PF L  L   ++L    +   G  A  YVGLFEMG+TFVLWL ALK  
Sbjct: 183 VVSLLLSFLVGLPFILVTLLLTQSLPSWDLKALG--AGIYVGLFEMGVTFVLWLVALKKA 240

Query: 241 QNTARISNLIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQ 288
             TA +S L+F +P +S+  +A I+ E I P+T IGL LI+  L +QQ
Sbjct: 241 DRTASMSTLVFITPVLSVGFIAWILQETITPSTFIGLGLILTALALQQ 288