Pairwise Alignments

Query, 303 a.a., EamA/RhaT family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., integral membrane domain protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  277 bits (708), Expect = 3e-79
 Identities = 146/280 (52%), Positives = 192/280 (68%), Gaps = 3/280 (1%)

Query: 10  GLASVLLWSTVATAFKLTLAELNPLQMVTVASIVSALALLVICAAMDKLKLIVPTLLANP 69
           G+A+V LWSTVATAFK+ L   +PLQ+V VA + S + L  I     KL L+   LL  P
Sbjct: 11  GMAAVFLWSTVATAFKIALGFYSPLQLVFVAVLTSIVTLGAILTWQKKLPLLKVQLLRRP 70

Query: 70  FYYLLLGLINPLAYYLILFKAYSLLPASQAQAINYSWAITLTLMAALFLGQRIRKQDWIA 129
            +YL+ GLINP  YY++LFKAYSLLPA QA ++NY+WA+ L L+AA  L Q +RK D IA
Sbjct: 71  TFYLVTGLINPFLYYVVLFKAYSLLPAQQALSLNYTWAVLLPLLAAPLLKQHLRKSDMIA 130

Query: 130 CAMSYLGVVVIATKGDLLGLQFESPLGVGLALLSTLLWAGYWILNTKNKADPIVGVLLGF 189
             ++Y GV +IAT GD+ G +F+SPLG+GLAL STLLW  YWI+NTK++ DP+V +LL F
Sbjct: 131 ALIAYSGVFIIATGGDVSGFRFDSPLGIGLALTSTLLWCLYWIVNTKDQGDPVVSLLLSF 190

Query: 190 LLAIPF-ALALCWHENLNWQGITTQGWLAVTYVGLFEMGITFVLWLSALKNTQNTARISN 248
           L+ +PF  + L   + L     + +  +A  YVGLFEMGITFVLWL ALK    TA IS 
Sbjct: 191 LIGLPFITITLLLTDAL--PSFSIKAVMAGMYVGLFEMGITFVLWLMALKTATRTANIST 248

Query: 249 LIFASPFISLFLLATIIGEAIHPTTLIGLVLIIAGLVVQQ 288
           L+F SP +S+  +A I+ E I   T IGL  I+AG+++QQ
Sbjct: 249 LVFLSPVMSIGFIAWILQETIATATYIGLGFILAGMMLQQ 288