Pairwise Alignments

Query, 261 a.a., ribosomal RNA small subunit methyltransferase J from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., Protein of unknown function (DUF548). from Pseudomonas stutzeri RCH2

 Score =  228 bits (582), Expect = 7e-65
 Identities = 123/235 (52%), Positives = 162/235 (68%), Gaps = 8/235 (3%)

Query: 26  QASDDSPFALVLSEERLELRKLDEPKLGAIYVDWVEGAVAHRRKFGGGKGQSIAKAAGLN 85
           Q  + + FAL + E  L+L+ L+    G + VD+VEGA AHRR+FGGG GQ IAKA G+ 
Sbjct: 32  QELEGAEFALQVGEAGLQLQLLEAQAPGPVRVDFVEGAAAHRRQFGGGSGQMIAKAVGIQ 91

Query: 86  KGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGLQRAKQDDEIGAWVSE 145
            GV P VLDATAGLGRDAFVLA+LGC V ++ER P++AALLEDGL RA  D E+GA ++ 
Sbjct: 92  PGVRPRVLDATAGLGRDAFVLATLGCEVSLIERQPLIAALLEDGLSRAAADSEVGA-IAA 150

Query: 146 RISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALVKKEMRVFQSLVGAD 205
           R++LL  ++ + + Q   +P    P V+YLDPM+PH   + K+ALVKKEMR+F+  VG D
Sbjct: 151 RMTLLKGNAIELMSQWQVEP----PQVIYLDPMFPH---RDKSALVKKEMRLFRPFVGDD 203

Query: 206 NDADALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFDVYVIAAMSG 260
            DA ALL  AL+LA  RVVVKRP  AP +   KP  ++E K +R+D+Y    + G
Sbjct: 204 MDAPALLAAALELASHRVVVKRPRKAPAIEGGKPGYSLEGKSSRYDIYPKKKLQG 258