Pairwise Alignments

Query, 261 a.a., ribosomal RNA small subunit methyltransferase J from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., Ribosomal RNA small subunit methyltransferase J from Pseudomonas aeruginosa PA14

 Score =  228 bits (580), Expect = 1e-64
 Identities = 127/242 (52%), Positives = 166/242 (68%), Gaps = 14/242 (5%)

Query: 18  QIAARWQ------LQASDDSPFALVLSEERLELRKLDEPKLGAIYVDWVEGAVAHRRKFG 71
           + A RW       L A D++ FA+ + EE L++ +L     G + VD+VEGA AHRRKFG
Sbjct: 20  EAARRWAERLGLPLAADDEAEFAVQVGEEGLQVLQLGPDSPGPVRVDFVEGASAHRRKFG 79

Query: 72  GGKGQSIAKAAGLNKGVTPVVLDATAGLGRDAFVLASLGCRVQMVERHPVVAALLEDGLQ 131
           GG GQ IAKA G+  G+ P VLDATAGLGRD FVLASLGC V +VER P++AALLEDGL+
Sbjct: 80  GGSGQMIAKAVGVQPGIRPRVLDATAGLGRDGFVLASLGCEVTLVERQPLIAALLEDGLE 139

Query: 132 RAKQDDEIGAWVSERISLLHASSHDALQQLASDPNFTSPDVVYLDPMYPHPENKKKTALV 191
           RA +D ++ A ++ R+ LL  +S D ++    +    +P VVYLDPM+PH   + K+ALV
Sbjct: 140 RAGRDPDV-APIAARMRLLGGNSADLMRAWDGE----APQVVYLDPMFPH---RDKSALV 191

Query: 192 KKEMRVFQSLVGADNDADALLEPALQLAQKRVVVKRPDYAPWLGNRKPSMAMETKKNRFD 251
           KKEMR+F+ LVG D DA ALL+ AL LA  RVVVKRP  AP +   KP  ++E K +R+D
Sbjct: 192 KKEMRLFRPLVGDDLDAPALLQAALALASHRVVVKRPRKAPIIEGPKPGYSLEGKSSRYD 251

Query: 252 VY 253
           +Y
Sbjct: 252 IY 253