Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1258 a.a., Serine hydroxymethyltransferase (EC 2.1.2.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  235 bits (600), Expect = 1e-65
 Identities = 162/543 (29%), Positives = 265/543 (48%), Gaps = 14/543 (2%)

Query: 222  YDQQPVMMLTLDERNHIQQVNHFAEQLLGYPADVMLGHHIRDFYQDEEVLTPRQMLLLPS 281
            ++     +L  D   +I Q N    ++ GY    +L   + +    +E        +L  
Sbjct: 704  FEHSTSAILITDPAGYIVQANEAFSRVSGYAVSQVLDQ-LPNMLTVDEQQEAHLRYVLKQ 762

Query: 282  RHASSVWRREVCYRHHSGETVWVRENIRPLVET----GTLLIVGEDITETRQLADQLAYQ 337
                S W  EV  +  +GE       I  +++      + +    DI+E +    ++   
Sbjct: 763  LQQHSTWEGEVWLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEQRIHRL 822

Query: 338  ARYDLLTHTLNRNQFELELAKALKETDSQLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQ 397
            A YD LTH  NR  F+  L  AL+  D Q     +++LDLD+ K +ND+ GH AGD  ++
Sbjct: 823  AYYDALTHLPNRTLFQDRLHTALQSADRQKTWVVLMFLDLDRFKPINDSLGHAAGDRMLK 882

Query: 398  FCASMLEDVLPFKATLARMGGDEFSVLLRDCTERD-----AVLVAQSIIHALSEVAFVWE 452
              A+ L   +    T+ARMGGDEF++LL+    R+     A+ VA+ I+ +L    FV E
Sbjct: 883  EMATRLLGCVADDDTVARMGGDEFTLLLQPRASREMALNRAINVAEQILASLVR-PFVLE 941

Query: 453  HIRFNLTCSIGIRMIDHTATSPQMVHAQADTACHAAKEEGRNRFNLYRQDDEDLRRRQLE 512
               F +T SIGI +          +   ADTA + AKE G+N F  Y+ D       +LE
Sbjct: 942  GREFFVTASIGIALSPQDGNELSQLMKNADTAMYHAKERGKNNFQFYQADMNASALERLE 1001

Query: 513  MESVNLVHDALANERIELFAQRIVPLNQPDVLLHFEVLVRIKNAAGEYVSPGIFVPASER 572
            +ES +L H    NE +  +  +         L   E L+R ++     V PG F+P  E 
Sbjct: 1002 LES-DLRHALEQNEFVLYYQPQFS--GDGKRLTGAEALLRWRHPRRGLVPPGDFIPVLEE 1058

Query: 573  YNLAHRLDRKIVEQTFNWLEARPQVLDKLGRVSINLSGNSIGNPDFVAFLLERLRDSRIP 632
              L   +   ++ +    L    Q   ++ +VS+N+S     +      +   LR + +P
Sbjct: 1059 LGLVVDVGDWVITEACRQLRTWHQAKVRVPKVSVNISARQFSDGQLGTRIANILRSTGLP 1118

Query: 633  CSKVCFEITETAAMRNLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQKLPVDIVKID 692
             + +  E+TE+  MR +++A+++L+ LK+LG  +A+DDFG+G SS  YL++ P+D++KID
Sbjct: 1119 PACLELELTESILMREVSEAMQILAGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLKID 1178

Query: 693  GIFVCDMDKNEMDRLMVRSIHELTKQMGKSTVAEFVENQQILEALQQIGVDYAQGYLFSR 752
              FV  +   E D  + R+I  +   +  + +AE VE  + L+ L++ G D  QGYLF R
Sbjct: 1179 RTFVDGLPSGEQDAQIARAIIAMAHSLNLAVIAEGVETHEQLDFLREHGCDEVQGYLFGR 1238

Query: 753  PQP 755
            P P
Sbjct: 1239 PMP 1241



 Score = 31.6 bits (70), Expect = 3e-04
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 27/183 (14%)

Query: 185 PLPTREESQILLEAQDITWRKITEDKLFQREASLR--------HYYDQQPVMMLTLDERN 236
           P   ++ + ++L   DIT RK+ E  L +RE            H Y Q  +    +   +
Sbjct: 398 PEKQQDHNAVILSISDITSRKLIELSLLEREGFWSDVVRTVPDHLYVQDVISQRMIFSNH 457

Query: 237 HIQQVNHF----AEQLLGYPADVMLGHHIRDFY------QDEEVLTPRQMLLLPSRHASS 286
           H+ Q   +      Q+  Y  +++L     D Y      Q     T      L  RH + 
Sbjct: 458 HLGQTLGYDRTELHQMGEYFWEILLHSDDADHYHSLRQAQRRGGYTQLLQCQLRFRHRNG 517

Query: 287 VWRREVCYRHHSGETVWVRENIRPLVETGTLLIVGEDITETRQLADQLA-YQARYDLLTH 345
            WR   C+          R+N     +   ++ V +D+TE  + ++ L   + RY +L  
Sbjct: 518 KWR---CFDIREQALARDRDN-----QVTRIIGVAKDVTEQIEASESLRDSEQRYRMLAE 569

Query: 346 TLN 348
           +++
Sbjct: 570 SIS 572