Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1247 a.a., sensory box/GGDEF domain/EAL domain protein from Pseudomonas fluorescens FW300-N2E2

 Score =  226 bits (577), Expect = 4e-63
 Identities = 186/624 (29%), Positives = 293/624 (46%), Gaps = 46/624 (7%)

Query: 163  RQFNAEIWHPELGAIVLECQFKPLPTREESQILLEAQDITWRKITEDKLFQREASLRHYY 222
            R F+  I   +    + E   +PLP   E  +L  A+DIT R + ++KL Q+ A++   +
Sbjct: 633  RDFSCHIRRNDGQIRLCEVSSRPLPIGNEDCMLTIARDITERHLMQEKL-QQAATV---F 688

Query: 223  DQQPVMMLTLDERNHIQQVNHFAEQLLGYPADVMLGHHIRDFYQDEEVLTPRQMLLLPSR 282
            +     +L  D + HI  VN    ++ GY     LGH            TPR  LL    
Sbjct: 689  ESTAEGVLITDTQQHISAVNRAFTEITGYSETEALGH------------TPR--LLASGL 734

Query: 283  HASSV-------------WRREVCYRHHSGETV--W-----VRENIRPLVETGTLLIVGE 322
            H S+              W+ E+  R  +GE    W     VR   R +      + V  
Sbjct: 735  HDSAFYAAMWHQLTAEGHWQGEISNRRKNGELYPSWLTISAVRNRDRQITH---FVAVFA 791

Query: 323  DITETRQLADQLAYQARYDLLTHTLNRNQFELELAKALKETDSQLRTHAMLYLDLDQLKV 382
            DI+  +    +L YQA +D LT   NR  FE  L  AL          A+L+LDLD+ K 
Sbjct: 792  DISSLKHAQARLDYQAHHDPLTGLPNRTLFESRLLAALNGQQENGSQGAVLFLDLDRFKH 851

Query: 383  LNDTAGHDAGDGAIQFCASMLEDVLPFKATLARMGGDEFSVLLRDCTE-RDAVLVAQSII 441
            +ND+ GH  GD  ++  A  L + L    T+AR+GGDEF +LL    +  DA  +AQ ++
Sbjct: 852  INDSLGHPVGDLLLKGIAVRLREQLRDIDTVARLGGDEFIILLPGLQQPSDAEHIAQKLL 911

Query: 442  HALSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQMVHAQADTACHAAKEEGRNRFNLYRQ 501
            +  +      EH  F ++ SIG  +          +   AD A + +K +GRNR   Y +
Sbjct: 912  NCFAAPFQAGEH-EFFISASIGTSLYPQDGCDVATLVKNADAAMYRSKAKGRNRVESYTR 970

Query: 502  DDEDLRRRQLEMESVNLVHDALANERIELFAQRIVPLNQPDVLLHFEVLVRIKNAAGEYV 561
            D       ++ +E  + +  A+    + L  Q  + L   + L+  E L+R  +     V
Sbjct: 971  DLTAQASERVALE--HELRRAIERNELSLSFQPKISLVD-NQLVGAEALIRWTHPTFGDV 1027

Query: 562  SPGIFVPASERYNLAHRLDRKIVEQTFNWLEARPQVLDKLGRVSINLSGNSIGNPDFVAF 621
             P  F+P +E   +  ++   ++E+    L       D LG +S+NL+G  +  P+ +  
Sbjct: 1028 PPEHFIPLAEENGMILQIGDWVLERACRQLCEWNDAYDSLGPLSVNLAGAQLRQPNLLGR 1087

Query: 622  LLERLRDSRIPCSKVCFEITETAAMRNLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYL 681
            + + LR+ ++    +  EITE   M    +A+ VL QLK LG  LA+DDFG+G SS  YL
Sbjct: 1088 IEQLLREHQLEPGLLQLEITENFIMSQAEEALTVLHQLKKLGVQLAIDDFGTGYSSLSYL 1147

Query: 682  QKLPVDIVKIDGIFVCDMDKNEMDRLMVRSIHELTKQMGKSTVAEFVENQQILEALQQIG 741
            ++LP+DI+KID  FV  +  +  D  +VR+I  L + M  + +AE VE     + L + G
Sbjct: 1148 KRLPLDILKIDQSFVRGLPDDPHDAAIVRAIIALGRSMQFTIIAEGVETLAQQQFLTEEG 1207

Query: 742  VDYAQGYLFSRPQPIADWVAEQLK 765
             +  QGY+ S P    ++ A  L+
Sbjct: 1208 CEQIQGYIVSLPLCADEFAATFLR 1231