Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 819 a.a., Sensory box/GGDEF family protein from Pseudomonas fluorescens FW300-N2E2

 Score =  347 bits (891), Expect = 1e-99
 Identities = 211/536 (39%), Positives = 301/536 (56%), Gaps = 10/536 (1%)

Query: 229 MLTLDERNHIQQVNHFAEQLLGYPADVMLGHHIRDFYQ--DEEVLTPRQMLL--LPSRHA 284
           ++T D    I  +N  AE +  + A+   G  +   +   D+   T    L+  + S   
Sbjct: 258 VITTDVEGAIAYMNPAAEAMTHWKAEHATGLPLAALFNLLDDNAQTEGLTLIEHILSGRL 317

Query: 285 SSVWRREVCYRHHSGETVWVRENIRPLVETGTL---LIVGEDITETRQLADQLAYQARYD 341
           S         +   G TV V     P+   G +   ++V  D+T+ RQ    L++QA +D
Sbjct: 318 SGASEHSKLIQRLDGSTVSVTLVGAPIRHAGKVSGAVLVLHDMTQERQYIANLSWQATHD 377

Query: 342 LLTHTLNRNQFELELAKALKETDSQLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQFCAS 401
            LT   NR +FE  L +AL     Q+  HA+++LDLDQ K++NDT GH AGD  ++   +
Sbjct: 378 ALTGLANRREFEYRLEQALHNLTRQVGRHALMFLDLDQFKLVNDTCGHAAGDELLRHICA 437

Query: 402 MLEDVLPFKATLARMGGDEFSVLLRDCTERDAVLVAQSIIHALSEVAFVWEHIRFNLTCS 461
           +L+  L    TLAR+GGDEF +LL +C+   A  +A+ +   +  + FVW+   F  T S
Sbjct: 438 LLQSGLRENDTLARLGGDEFGILLENCSPEAAEKIAEGLRQTVQNLHFVWKGRPFVTTVS 497

Query: 462 IGIRMIDHTATSPQMVHAQADTACHAAKEEGRNRFNLYRQDDEDLRRRQLEMESVNLVHD 521
           IG+  I  T T+ +     AD AC+ AKE+GRNR  +Y  DD +L  R  EM  V  +H 
Sbjct: 498 IGLVHIAQTPTTLEASLRAADMACYMAKEKGRNRVQVYHADDSELSLRFGEMAWVQRLHM 557

Query: 522 ALANERIELFAQRIVPLNQPD-VLLHFEVLVRIKNAAGEYVSPGIFVPASERYNLAHRLD 580
           AL   R  L+AQ I  L   D    H E+L+R+ + AG  + P  F+PA+ERY L   LD
Sbjct: 558 ALEENRFCLYAQEIAALGPGDHGGGHIEILLRLHDEAGRMILPDSFIPAAERYGLMTSLD 617

Query: 581 RKIVEQTFNWLE--ARPQVLDKLGRVSINLSGNSIGNPDFVAFLLERLRDSRIPCSKVCF 638
           R +VE  F  +           +   +INLSG +IG+  F+ FL ++     IP   +CF
Sbjct: 618 RWVVENVFKIIRQCLNDSRQGPMAMCAINLSGTTIGDQAFLDFLRKQFVAYSIPPEMICF 677

Query: 639 EITETAAMRNLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQKLPVDIVKIDGIFVCD 698
           EITET+A+ NL  AI+ +++LKSLGC  +LDDF +G+SSF YL+ LPVD +KIDG FV D
Sbjct: 678 EITETSAISNLGSAIRFINELKSLGCYFSLDDFCAGMSSFAYLKHLPVDFLKIDGSFVKD 737

Query: 699 MDKNEMDRLMVRSIHELTKQMGKSTVAEFVENQQILEALQQIGVDYAQGYLFSRPQ 754
           M  + ++R MV  I+ +   MGK T+AEFVE  QI +AL +IGVDYAQGY+  RPQ
Sbjct: 738 MLDDPINRAMVEVINHIGHVMGKRTIAEFVETAQIEQALLEIGVDYAQGYVIERPQ 793