Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1278 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) from Pseudomonas syringae pv. syringae B728a

 Score =  233 bits (593), Expect = 6e-65
 Identities = 169/552 (30%), Positives = 267/552 (48%), Gaps = 18/552 (3%)

Query: 222  YDQQPVMMLTLDERNHIQQVNHFAEQLLGYPADVMLGHHIRDFYQDEEVLTPRQMLLLPS 281
            ++     +L  D   +I Q N    ++ GY    +L   +      E     R   +L  
Sbjct: 724  FEHSTSAILITDPAGYIVQANEAFTRVSGYEVAQVLDQ-LPGMLTVESEQETRLRHILRQ 782

Query: 282  RHASSVWRREVCYRHHSGETVWVRENIRPLVET----GTLLIVGEDITETRQLADQLAYQ 337
             +    W  E+  +  +GE       I  +++      + +    DI+E +   D++   
Sbjct: 783  LNGQGTWEGEIRLKRRNGEHYPAWVGITAVLDDEGDLASYVCFFSDISERKASEDRIHRL 842

Query: 338  ARYDLLTHTLNRNQFELELAKALKETDSQLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQ 397
            A YD LTH  NR  F+  L  AL+  + Q     +++LDLD+ K +ND+ GH AGD  +Q
Sbjct: 843  AYYDALTHLPNRTLFQDRLHSALQHAERQQAWVVLMFLDLDRFKPINDSLGHAAGDRMLQ 902

Query: 398  FCASMLEDVLPFKATLARMGGDEFSVLLRDCTERDAVL-----VAQSIIHALSEVAFVWE 452
              A+ L   +    T+ARMGGDEF++LL     R+A L     VA+ I+ +L    FV E
Sbjct: 903  EMATRLLACVSVDDTVARMGGDEFTLLLEPDESREAALNRAIHVAERILTSLI-TPFVLE 961

Query: 453  HIRFNLTCSIGIRMIDHTATSPQMVHAQADTACHAAKEEGRNRFNLYRQDDEDLRRRQLE 512
               F +T SIGI +          +   ADTA + AKE G+N F  Y+ D       +LE
Sbjct: 962  GREFFVTASIGIALSPQDGKELSQLMKNADTAMYHAKERGKNNFQFYQADMNATALERLE 1021

Query: 513  MESVNLVHDALANERIELFAQRIVPLNQPDV--LLHFEVLVRIKNAAGEYVSPGIFVPAS 570
            +ES +L H AL  +   LF Q   P    D   L   E L+R ++     V P  F+P  
Sbjct: 1022 LES-DLRH-ALEQKEFTLFYQ---PQFSGDGKRLTGAEALLRWRHPRRGLVPPNDFIPVL 1076

Query: 571  ERYNLAHRLDRKIVEQTFNWLEARPQVLDKLGRVSINLSGNSIGNPDFVAFLLERLRDSR 630
            E   L   +   ++ +    L+   Q   ++ +VS+N+S     +      +   L  + 
Sbjct: 1077 EELGLVVEVGDWVLAEACRQLKHWHQARVRVPKVSVNISARQFSDGQLGKRIAHILEQAG 1136

Query: 631  IPCSKVCFEITETAAMRNLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQKLPVDIVK 690
            +  + +  E+TE+  MR +N+A+++L  LK+LG  +A+DDFG+G SS  YL++ P+D++K
Sbjct: 1137 LSPACLELELTESILMREVNEAMQILDGLKNLGLSIAVDDFGTGYSSLNYLKQFPIDVLK 1196

Query: 691  IDGIFVCDMDKNEMDRLMVRSIHELTKQMGKSTVAEFVENQQILEALQQIGVDYAQGYLF 750
            ID  FV  +   E D  + R+I  +   +  S +AE VE  + LE L++   D  QGYLF
Sbjct: 1197 IDRTFVDGLPSGEQDAQIARAIIAMAHSLNLSVIAEGVETHEQLEFLREHDCDEVQGYLF 1256

Query: 751  SRPQPIADWVAE 762
             RP P A + A+
Sbjct: 1257 GRPMPPAQFEAQ 1268