Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 820 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  266 bits (681), Expect = 3e-75
 Identities = 188/593 (31%), Positives = 300/593 (50%), Gaps = 35/593 (5%)

Query: 185 PLPTREESQILLEAQDITWRKITEDKLFQREASLRHYYDQQPVMMLTLDERNHIQQVNHF 244
           P+P   E+ +L++A +    ++       R+  L+   +     ++T+D++  I+ +N  
Sbjct: 224 PMPRTIETWLLVDAFNGMRLQV-----HSRQLRLQSVLESTSDGIITVDDKGSIESINGA 278

Query: 245 AEQLLGYPADVMLGHHIRDFYQ--------DEEVLTPRQMLLLPSRHASSVWRREVCYRH 296
           AE++LG   D  +G  + D            EE    R++L L  R      RR      
Sbjct: 279 AERVLGLTRDEAVGRPLGDLIPLDRLAEDGGEEGALSRRLLALRGREIDLPARRADGAAF 338

Query: 297 HSGETVWVRENIRPLVETGTLLIVGEDITETRQLADQLAYQARYDLLTHTLNRNQFELEL 356
           H      ++ +   L E      +  D+T+ + + D+L + A+ D LT  +NR  F  +L
Sbjct: 339 HLS----LKLSDFMLGERRYFNALIADVTDRKAMIDRLTFLAQRDPLTGLINRRSFFDDL 394

Query: 357 AKALKETDS-QLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQFCASMLEDVLPFKATLAR 415
            KA+           A++ +DLD+ K +ND+ GH AGD  ++  A +L   L     LAR
Sbjct: 395 EKAVARAGRFPAAGVAVISIDLDRFKYVNDSLGHQAGDCLLKEVAEVLFGRLRETDLLAR 454

Query: 416 MGGDEFSVLLRDCTERDAVLVAQSIIHALSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQ 475
           +GGDEF+VLL       A+ VA+++   L++ AF ++     + CS+G+         P+
Sbjct: 455 LGGDEFAVLLHGVNREGALHVAEALRLCLADYAFSYDGKSVEIGCSLGVATWAADVDDPE 514

Query: 476 MVHAQADTACHAAKEEGRNRFNLYRQDDEDLRRRQLEMESVN-LVHDALANERIELFAQR 534
            + A+AD A   AK  GRNR +L+ + D ++R R +     + L+   L N       Q 
Sbjct: 515 DLLARADMAMRLAKRAGRNRVHLFEEGDLEVRARVVADAGYSKLIDRGLRNNLFRPVFQP 574

Query: 535 IVPLNQPDVLLHFEVLVRIKNAAGEYVSPGIFVPASERYNLAHRLDRKIV-------EQT 587
           I+ +    V+ H E L R+ + A   ++  + +P +ER+ LA  +DR+I+        + 
Sbjct: 575 IIDVTSGAVVGH-ETLARLHDPAAIGLTMDVLIPVAERFGLAVEIDRQIILAVTEALAED 633

Query: 588 FNWLEARPQVLDKLGRVSINLSGNSIGNPDFVAFLLERLRDSRIPCSKVCFEITETAAMR 647
             WLE         G +S NLS  S+G+    + +   +   R+P   + FEITETAA+ 
Sbjct: 634 AGWLEG--------GFLSFNLSAQSVGDGRIFSAVRRLIATRRLPPQALIFEITETAAIA 685

Query: 648 NLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKNEMDRL 707
           +L  A   L  L  LGC  ALDDFGSG SSF YL++LPVD +KIDG +V D+  + +   
Sbjct: 686 SLAAARTFLKALTDLGCKTALDDFGSGYSSFTYLRELPVDFLKIDGRYVRDIHHDPVKAA 745

Query: 708 MVRSIHELTKQMGKSTVAEFVENQQILEALQQIGVDYAQGYLFSRPQPIADWV 760
           MV++I+ +   MG  T+AE VE    LE L+Q GVD AQG+LF RP P+  W+
Sbjct: 746 MVQAINTVAHAMGMRTIAECVEEASGLEVLRQSGVDCAQGFLFGRPAPLGPWI 798