Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 731 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella loihica PV-4

 Score =  281 bits (718), Expect = 1e-79
 Identities = 164/446 (36%), Positives = 261/446 (58%), Gaps = 6/446 (1%)

Query: 313 ETGTLLIVGEDITETRQLADQLAYQARYDLLTHTLNRNQFEL--ELAKALKETDSQLRTH 370
           E G +L++ E + E  Q ++  +    +D LT   NR  FE   +LA   +      R+ 
Sbjct: 273 EDGPILMLVEPVGEPVQESEAHSVSLNFDPLTGLPNRAYFEALYDLANPCQCE----RST 328

Query: 371 AMLYLDLDQLKVLNDTAGHDAGDGAIQFCASMLEDVLPFKATLARMGGDEFSVLLRDCTE 430
            + +++LD+ +V+N+ +GH AGD  +   A+ L  ++  +  +AR+ GDEF +L+ +   
Sbjct: 329 FVGFINLDRFQVVNNVSGHRAGDQLLCQLAARLSQLVRKEDVIARLSGDEFGILMPNIDV 388

Query: 431 RDAVLVAQSIIHALSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQMVHAQADTACHAAKE 490
           + A  VA+ I  A++   F WE    +++ S+G+   +    S   +  +A  AC  AKE
Sbjct: 389 QIAEQVAERICQAMANHEFSWEGRSHSVSVSMGLARCESEVDSVSDLLRRASAACRLAKE 448

Query: 491 EGRNRFNLYRQDDEDLRRRQLEMESVNLVHDALANERIELFAQRIVPLNQPDVLLHFEVL 550
           +G N +  Y   D  + +   EM +   +  ALAN+R ELF Q I PL   D  LH E+L
Sbjct: 449 KGGNAWYFYSTQDPVVEKLNTEMSASVDIVGALANDRFELFYQPIEPLYASDDGLHLEIL 508

Query: 551 VRIKNAAGEYVSPGIFVPASERYNLAHRLDRKIVEQTFNWLEARPQVLDKLGRVSINLSG 610
           +R+++  GE + PGIF+PA+ER+NLA +LDR ++++   W      +   L  VS+NLS 
Sbjct: 509 LRMRSTEGELIPPGIFLPAAERFNLAAKLDRWVIDKLLRWGSENLALWQSLSMVSVNLSA 568

Query: 611 NSIGNPDFVAFLLERLRDSRIPCSKVCFEITETAAMRNLNQAIKVLSQLKSLGCVLALDD 670
            SI + +F+ +L  RL       SK+CFEITETAA+  L+ A  +++ +K LGC LALDD
Sbjct: 569 LSISDSEFINWLEMRLLGEPELVSKLCFEITETAAVSQLDHATGLINTVKPLGCKLALDD 628

Query: 671 FGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKNEMDRLMVRSIHELTKQMGKSTVAEFVEN 730
           FGSG SSF YL+ L VD VKIDG F+  + ++  D+ +V +I +L + M    VAEFVE+
Sbjct: 629 FGSGFSSFAYLKLLDVDYVKIDGQFIQHLCEDRADQAIVAAICQLGRDMAFEIVAEFVES 688

Query: 731 QQILEALQQIGVDYAQGYLFSRPQPI 756
            ++ + LQ++GV++ QGY  +RP+ +
Sbjct: 689 VEVAKHLQKLGVEFGQGYGIARPESL 714