Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 816 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Shewanella loihica PV-4

 Score =  224 bits (570), Expect = 2e-62
 Identities = 165/579 (28%), Positives = 292/579 (50%), Gaps = 22/579 (3%)

Query: 194 ILLEAQDITWRKITEDKLFQREASLRHYYDQQPVMMLTLDERNHIQQVNHFAEQLLGYPA 253
           +LL   DIT  K  + +L      L+   +     ++  D    I  +N  AE+L G+  
Sbjct: 241 MLLTLTDITSIKRAKSQLDTENRRLKIMLNAIGDAVIATDSEAMITFMNPIAERLTGWVC 300

Query: 254 DVMLGHHIRDFYQDEEVLT----PRQMLLLPSRHASSVWRREVCYRHHSGETVWVRENIR 309
              +G HI       +  T    P  + +      +             G T  + ++  
Sbjct: 301 RDAIGLHIEQVMDLCDAKTKYRSPNPVTIAIKEKRNVAMALNCQLNSLDGTTFQIEDSAA 360

Query: 310 PLVET-GTL---LIVGEDITETRQLADQLAYQARYDLLTHTLNRNQFELELAKALKETDS 365
           P+ ++ G +   +IV  D +E+  ++ ++++ A +D LT   NR      +  A    DS
Sbjct: 361 PITDSEGKVTGGIIVFHDCSESVAMSLKMSHLANHDQLTDLPNRILLHDRINHACAVADS 420

Query: 366 QLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQFCASMLEDVLPFKATLARMGGDEFSVLL 425
             ++ A++ +D+D  K LND+ GH  GD  I+  A  L+ ++   ATL R+GGDEF +LL
Sbjct: 421 YDKSVALMLIDIDHFKYLNDSLGHSYGDQVIKQVAKRLQSLIDPNATLGRIGGDEFVLLL 480

Query: 426 RDCTERDAV-LVAQSIIHALSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQMVHAQADTA 484
              T    V  +A  I+ +L+   F  +   + L+ S+GI +    A   + +    D A
Sbjct: 481 PSLTATSQVDSIATDIVRSLN-TPFRIDGQEYTLSVSVGISIYPSDALRAEELMTHVDAA 539

Query: 485 CHAAKEEGRNRFNLYRQD-DEDLRRRQLEMESVNLVHDALANERIELFAQRIVPLNQPDV 543
            + AK+ GRNRF  + +D +++L +R    E V L+  A+  E IE++ Q  V L   ++
Sbjct: 540 MYRAKDLGRNRFCYFSEDLEQELTKRH---ELVTLLRTAIDTEAIEVYYQPKVDLKTKEI 596

Query: 544 LLHFEVLVRIKNAAGEYVSPGIFVPASERYNLAHRLDRKIVEQTFNWLEARPQVLDKLGR 603
           +   E L R+ + +G+ +SP  F+P +E   L H+L   I++Q+    +A      K GR
Sbjct: 597 I-GAEALARLYDPSGKLISPLDFIPLAEETGLIHQLGEIILKQSCMAAKA----WQKRGR 651

Query: 604 ---VSINLSGNSIGNPDFVAFLLERLRDSRIPCSKVCFEITETAAMRNLNQAIKVLSQLK 660
              +++N++     NP+F   + + L  + +  S +  E+TE++ M + ++A+ VL+ L 
Sbjct: 652 PLQIAVNIAAKQFTNPEFCDSVAKVLELTGLDSSFLELEVTESSLMYDFDEALNVLNTLS 711

Query: 661 SLGCVLALDDFGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKNEMDRLMVRSIHELTKQMG 720
           SLG  +A+DDFG+G SS  YL+  PV+ +KID  FV DM  +E    +V+++  L K + 
Sbjct: 712 SLGLSIAIDDFGTGYSSLSYLKFFPVNTLKIDQSFVKDMLGDEQSLDIVKAVIHLAKSLK 771

Query: 721 KSTVAEFVENQQILEALQQIGVDYAQGYLFSRPQPIADW 759
              +AE +E+ + L+ L  +  +  QGY+FS+P P+ ++
Sbjct: 772 LKLIAEGIEDAEQLQKLVALECEQGQGYMFSKPLPLKEF 810