Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  227 bits (578), Expect = 3e-63
 Identities = 197/696 (28%), Positives = 313/696 (44%), Gaps = 46/696 (6%)

Query: 86   QRLRTNQKLLESIFDQSTHYIGIFDLEGRIISCNGKLQGLL------YRHGESLLRPIWQ 139
            Q LR    +L++I +     + ++D E R+I+CN + + LL      +  G   L  + +
Sbjct: 594  QALRNQNAILQNILENLPDGVSLYDPEQRMIACNERFRTLLDLPDTLFAQGYPTLEDMVR 653

Query: 140  HKGWEDSAVEHIQNYFSESVPQT--RQFNAEIWHPELGAIVLECQFKPLPTREESQILLE 197
                        +   +  V +   R  N  +        VLE   + +   + S I++ 
Sbjct: 654  FNARRGEYGPGDEERRTRGVLRALQRPNNTAVLRERPDGTVLE--IRQVNLGDGSTIIIY 711

Query: 198  AQDITWRKITEDKLFQREASLRHYYDQQPVMMLTLDERNHIQQVNHFAEQLLGYPADVML 257
              DIT R   E +L   E      +   P  ++  D+ N I  VN     + GY  + +L
Sbjct: 712  T-DITARHRAEAELKLAEK----VFANSPEAIMICDQGNRIISVNRAFCDITGYAQEEVL 766

Query: 258  GH---------HIRDFYQDEEVLTPRQMLLLPSRHASSVWRREVCYRHHSGETV--WVRE 306
            G          H +DFY        RQM  +     +  W  E+  R  +GE    W+  
Sbjct: 767  GQDPRMLASGRHDKDFY--------RQMWEI--LRDTGAWAGEIWDRRKNGEIYPKWMTI 816

Query: 307  NIRPLVETGTL---LIVGEDITETRQLADQLAYQARYDLLTHTLNRNQFELELAKALKET 363
            N     ++G L   + +  DITE ++   ++ + A +D LT   NR   E  L ++L + 
Sbjct: 817  NAVHDTQSGALTHYITLFSDITERKETEARIHHLAHHDPLTGLPNRFTLEARLEQSLADA 876

Query: 364  DSQLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQFCASMLEDVLPFKATLARMGGDEFSV 423
                   A++++DLD+ K +ND+ GH  GD  +   A  L   +    T+AR+GGDEF V
Sbjct: 877  RRHGHKVAVMFMDLDRFKTINDSLGHAVGDSLLMEIAHRLRSAVRESDTVARLGGDEFVV 936

Query: 424  LLRDCT-ERDAVLVAQSIIHALSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQMVHAQAD 482
            +L D     DA  VA  II  ++    V  H   + + SIGI +      +   V   AD
Sbjct: 937  VLPDVEGANDAAHVAGKIIEDVARSLRVGAH-ELHTSASIGISLYPDDGETVPTVMQNAD 995

Query: 483  TACHAAKEEGRNRFNLYRQDDEDLRRRQLEMESVNLVHDALANERIELFAQRIVPLNQPD 542
            TA + AK  GRN F  +          +LE+E    +  A+ N+ +EL  Q    L   D
Sbjct: 996  TAMYHAKAIGRNNFQFFASAMNRAATERLELE--RKLRQAMVNDELELHFQPQFAL-AAD 1052

Query: 543  VLLHFEVLVRIKNAAGEYVSPGIFVPASERYNLAHRLDRKIVEQTFNWLEA-RPQVLDKL 601
             +   E L+R ++     + P  F+P +E   L   +   +++     L+A   Q L  L
Sbjct: 1053 RVTGVEALLRWRHPEDGLIPPDRFIPIAEETGLIVGIGDWVLQAACRQLKAWLDQGLPPL 1112

Query: 602  GRVSINLSGNSIGNPDFVAFLLERLRDSRIPCSKVCFEITETAAMRNLNQAIKVLSQLKS 661
             R+++NLS   +   +F + +   L+++ +P   +  EITE+  M    +AI  L  L  
Sbjct: 1113 -RMAVNLSTRQLKEKEFPSRVAAILQETGLPAVLLELEITESGVMERPEEAITTLQALND 1171

Query: 662  LGCVLALDDFGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKNEMDRLMVRSIHELTKQMGK 721
            +G  LA+DDFG+G SS  YL+  P+D +KID  FV D++++  D  + R    L   +G 
Sbjct: 1172 MGVTLAIDDFGTGYSSLSYLKLFPIDRLKIDRSFVRDIERDPDDAAIARGTIALAHSLGL 1231

Query: 722  STVAEFVENQQILEALQQIGVDYAQGYLFSRPQPIA 757
              VAE VE    L+ L   G D  QGY FSRP P+A
Sbjct: 1232 EVVAEGVETSAQLDMLAADGCDEVQGYFFSRPLPLA 1267



 Score = 35.4 bits (80), Expect = 2e-05
 Identities = 18/58 (31%), Positives = 29/58 (50%)

Query: 199 QDITWRKITEDKLFQREASLRHYYDQQPVMMLTLDERNHIQQVNHFAEQLLGYPADVM 256
           QDIT RK+ E++  ++   LR      P  +   DE   +Q  N    ++LG PA+ +
Sbjct: 453 QDITERKLAEEEYRRQSTQLRAVLQNMPQGISVFDEHLRLQLWNEGMREVLGLPAEAL 510