Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1076 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  240 bits (613), Expect = 3e-67
 Identities = 202/595 (33%), Positives = 290/595 (48%), Gaps = 41/595 (6%)

Query: 188  TREESQILLEAQDITWRKITEDKLFQREASLRHYYDQQPVMMLTLDERNHIQQVNHFAEQ 247
            +R  +Q++LE  +   R+  E  L + EA  R  ++     +           VN    +
Sbjct: 482  SRANAQLMLENAE---RRTVEQALRRAEARFRGIFEHALEGIFQSTPEGRFLSVNPAMAR 538

Query: 248  LLGYPADVMLGHHIRDF----YQDEEVLTPRQMLLLPSRHASSVWRREVCYRHHSGETVW 303
            +LGY     L   +       Y D      R   +        V   E   R   G+ +W
Sbjct: 539  ILGYEGVQELLEGVESIGDGVYADP---ARRDEFVARMEEHGQVNAFEFRGRRKGGDLIW 595

Query: 304  VRENIR--PLVETGTLLIVG--EDITETRQLADQLAYQARYDLLTHTLNRNQFELELAKA 359
            +  N R  P  +  T+   G  ED+T   +  ++L +QA +D LT   NR  F   L  A
Sbjct: 596  LSVNARRVPGADGATMYYEGFLEDVTMGHESRERLEHQAFHDPLTGLPNRVLFHDRLQMA 655

Query: 360  LKETDSQLR-THAMLYLDLDQLKVLNDTAGHDAGDGAIQFCASMLEDVLPFKATLARMGG 418
            LK    +   T AMLYLDLD+ KV+ND+ GHD GD  ++  ++ L + +    T+AR GG
Sbjct: 656  LKRAARRRNYTFAMLYLDLDRFKVINDSLGHDVGDALLKVVSAKLRECVRDVDTVARFGG 715

Query: 419  DEFSVLLRDCTERD-AVLVAQSIIHALSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQMV 477
            DEF VLL +   R  AV VA+ I   L+E   +  H  F  T SIGI +     ++P+ +
Sbjct: 716  DEFGVLLEETPTRGTAVRVARRIRAHLAEPVRIGPHEVFT-TASIGIVLRTDQYSTPEEL 774

Query: 478  HAQADTACHAAKEEGRNRFNLY--RQDDEDLRRRQLEMESVNLVHDALANERIELFAQRI 535
               ADTA + AKE+G++RF ++  R  +E LR   +E +    +  A+  + + L  Q +
Sbjct: 775  VRDADTAMYRAKEQGQSRFKVFNKRMREEALRLLTIETD----LRRAVERQEMRLHYQPV 830

Query: 536  VPLNQPDVLLH-FEVLVRIKNAAGEYVSPGIFVPASERYNLAHRLDRKIVE----QTFNW 590
            V L   D  LH  E L+R     G  +SP  FVP +E   L   +    +E    Q   W
Sbjct: 831  VALE--DGGLHGVEALLRWTRTEGGDISPAEFVPVAEDTGLITSIGAFALEEVCLQLRRW 888

Query: 591  LEARPQVLDKLGRVSINLSGNSI---GNPDFVAFLLERL-RDSRIPCSKVCFEITETAAM 646
             EA    L   G V +N+SG      G P  V  LLER   D R     + FE+TE+  M
Sbjct: 889  NEAG---LPPPGVVHVNISGRQFMQPGLPHAVEMLLERTGTDPR----SLRFEVTESVLM 941

Query: 647  RNLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKNEMDR 706
            R+ +QAI V++QL+ LG  L LDDFG+G SS GYL++LPVD +KID  FV  ++ +   +
Sbjct: 942  RHGSQAITVMAQLRDLGIRLCLDDFGTGYSSLGYLKRLPVDSIKIDRSFVAGLEHDRDGQ 1001

Query: 707  LMVRSIHELTKQMGKSTVAEFVENQQILEALQQIGVDYAQGYLFSRPQPIADWVA 761
             +VRSI  L   +G   VAE VE     E L  +G  YAQG+L++ P    D  A
Sbjct: 1002 AIVRSIVSLGLHLGLEIVAEGVETPTQAEMLASLGCRYAQGFLYAPPVSADDLAA 1056