Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1162 a.a., sensory box/FOG: EAL domain/GGDEF domain containing protein from Marinobacter adhaerens HP15

 Score =  222 bits (565), Expect = 1e-61
 Identities = 170/583 (29%), Positives = 294/583 (50%), Gaps = 35/583 (6%)

Query: 198  AQDITWRKITED--KLFQREASLRHYYDQQPVMMLTLDERNHIQQVNHFAEQLLGYPADV 255
            A+DIT R  TE+  ++ QR            V+    D    +  VN    Q+ G+ ++ 
Sbjct: 587  AKDITKRVRTEEQQRIMQRSVEAS---SNAVVITNARDPGFPVVYVNPAFSQITGFGSEE 643

Query: 256  M----LGHHIRDFYQDEEVLTPRQMLLLPSRHASSVWRREVCYRHHSGETVWVRENIRPL 311
            +    LG  I +  +D+++   R  + +    + SV  R   YR   G   W +  + P+
Sbjct: 644  VEGQSLGFLIGEGSEDDDI--ERIKVAVREHRSVSVTMRS--YRK-DGAPFWYQLFLSPV 698

Query: 312  V----ETGTLLIVGEDITETRQLADQLAYQARYDLLTHTLNRNQFELELAKALKETDSQL 367
                 E    + V  DI+E ++  +++AYQA +DLLT   NR+ F   L    +      
Sbjct: 699  RDDEGEVTHFVAVINDISEKKEQDEEMAYQATHDLLTGLANRSLFNDRLKHDFELAKRHS 758

Query: 368  RTHAMLYLDLDQLKVLNDTAGHDAGDGAIQFCASMLEDVLPFKATLARMGGDEFSVLLRD 427
            ++ A+L++DLD+ K +NDT GH  GD  +   A  L  ++    TLAR GGDEF +LL D
Sbjct: 759  QSMAVLFIDLDEFKPINDTLGHRVGDKLLVSVAERLNSLIRPSDTLARFGGDEFVLLLPD 818

Query: 428  CTERD-AVLVAQSIIHALSEVAFVWEHIRFNLTCSIGIRMIDHTATSPQMVHAQADTACH 486
              E   A  +A+ I+  L++   + ++   +++ SIGI    H++  P+ +  +AD A +
Sbjct: 819  LEETGLAEEIAERILQELAKPHQI-DNNELHISASIGIATNSHSSRFPEKLLQRADMAMY 877

Query: 487  AAKEEGRNRFNLYRQDDEDLRRRQLEMESVNLVHDALANERIELFAQRIVPLNQPDVLLH 546
             AK++GR+ + +Y  D ++    ++ +   N + +A+  +++ L  Q +V  N    ++ 
Sbjct: 878  KAKQQGRDTYEIYSADLDEALSTRVTLR--NDLQEAIKGDQLRLHYQPLV--NADGSIVS 933

Query: 547  FEVLVRIKNAAGEYVSPGIFVPASERYN----LAHRLDRKIVEQTFNWLEARPQVLDKLG 602
             E LVR ++     +SP  F+P +E       L   + RK  E     +E       ++G
Sbjct: 934  LEALVRWQHPQKGSISPADFIPIAEETGQIVPLGKWVTRKACEDALILIERGL----RMG 989

Query: 603  RVSINLSGNSIGNPDFVAFLLERLRDSRIPCSKVCFEITETAAMRNLNQAIKVLSQLKSL 662
             +++NLS      P+F+  L + L ++ +P   +  E+TE   M++   A  +L+ L+ +
Sbjct: 990  CMAVNLSPMQFHRPNFLNVLRQILEETGLPPEYLELELTEGILMKDTGGAKNILNDLRGM 1049

Query: 663  GCVLALDDFGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKNEMDRLMVRSIHELTKQMGKS 722
            G   A+DDFG+G SSFGYL++LPVD +KID  FV D+   E D  + + +  L +++G  
Sbjct: 1050 GVKTAIDDFGTGFSSFGYLRELPVDKIKIDRSFVEDVTSCEKDAAVCKGVITLARELGMR 1109

Query: 723  TVAEFVENQQILEALQQIGVDYAQGYLFSRPQPIAD---WVAE 762
             VAE VE ++    L + G    QGY F++P  + +   WV E
Sbjct: 1110 VVAEGVETEEQYRYLAKHGCTGFQGYYFAKPMALDELIVWVEE 1152



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 15/56 (26%), Positives = 22/56 (39%)

Query: 215 EASLRHYYDQQPVMMLTLDERNHIQQVNHFAEQLLGYPADVMLGHHIRDFYQDEEV 270
           E   R  YD  P  + +LD     + +N   +  LG P   + G H  +    E V
Sbjct: 474 EQRFRSLYDHNPDAVFSLDADGRYRDINPATKHSLGVPNCELRGRHFTERINKETV 529