Pairwise Alignments

Query, 768 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 997 a.a., sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  233 bits (595), Expect = 3e-65
 Identities = 167/471 (35%), Positives = 249/471 (52%), Gaps = 23/471 (4%)

Query: 295 RHHSGETVWVRENIRPLVET--GTLLIVG--EDITETRQLADQLAYQARYDLLTHTLNRN 350
           RH     +W+R N R + +    TL   G   DIT + +   QLA+QA +D LT   NR 
Sbjct: 509 RHREDRELWLRVNARRVADAHDATLFYEGFLTDITISHRSRQQLAHQAYHDPLTGLPNRL 568

Query: 351 QF----ELELAKALKETDSQLRTHAMLYLDLDQLKVLNDTAGHDAGDGAIQFCASMLEDV 406
            F    +L + +A + TD+      +LYLDLD+ K++ND+ GH  GD  ++  A  L   
Sbjct: 569 LFLDHLQLAMQRAARRTDAMF---TVLYLDLDRFKIINDSLGHGIGDALLREVACTLRRC 625

Query: 407 LPFKATLARMGGDEFSVLLRDCTE-RDAVLVAQSIIHALSEVAFVWEHIRFNLTCSIGIR 465
           +    T+AR GGDEF++LL D      AV +A+ I  +L++   +  H  F  T SIGI 
Sbjct: 626 VRDVDTVARFGGDEFAILLEDTGNCAGAVRIARRIRESLAQPVNIAGHEVFT-TASIGIV 684

Query: 466 MIDHTATSPQMVHAQADTACHAAKEEGRNRFNLY--RQDDEDLRRRQLEMESVNLVHDAL 523
           +      +P+ +   ADTA + AKE G++RF ++  R  ++ LR   LE +         
Sbjct: 685 LQTRDYLTPEDILRDADTAMYRAKEMGKSRFKVFNARMREDTLRLMALETDL------RF 738

Query: 524 ANERIELFAQRIVPLNQPDVLLH-FEVLVRIKNAAGEYVSPGIFVPASERYNLAHRLDRK 582
           A ER EL  +    ++  D  LH FE L+R +    E VSP  F+P +E   L   +   
Sbjct: 739 AVERGELSLRYHPIVDLEDGSLHGFESLLRWRRG-NEDVSPAEFIPVAEDAGLIADIGAF 797

Query: 583 IVEQTFNWLEARPQVLDKLGRVSINLSGNSIGNPDFVAFLLERLRDSRIPCSKVCFEITE 642
           ++E     + A        G V +N+SG  +  P F   + E LR   I  S + FE+TE
Sbjct: 798 VIEDVCRQVAAWQDTACDCGIVHVNISGRQLMRPGFAQMVDEILRRHGIAGSCLRFEVTE 857

Query: 643 TAAMRNLNQAIKVLSQLKSLGCVLALDDFGSGLSSFGYLQKLPVDIVKIDGIFVCDMDKN 702
           +  +R+   A+ V+ QL+ LG  L LDDFG+G SS GYL++LPV+ +KID  FV  M+K+
Sbjct: 858 SVLVRHGTLAVSVMHQLRELGIRLCLDDFGTGYSSLGYLRRLPVESLKIDRSFVWGMEKD 917

Query: 703 EMDRLMVRSIHELTKQMGKSTVAEFVENQQILEALQQIGVDYAQGYLFSRP 753
           E  R +VR I  L   +G   VAE VE ++    L+ +G  Y QG+L+++P
Sbjct: 918 EAGRALVRGILTLGLHLGLEVVAEGVETEEQAVLLRDMGCRYGQGFLYAKP 968