Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 378 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  127 bits (319), Expect = 5e-34
 Identities = 94/333 (28%), Positives = 154/333 (46%), Gaps = 6/333 (1%)

Query: 32  LPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYGRRTVALGGISIYALSA 91
           LPA+  IS A  V  A A  T++ F+F   +G L  GPL+D+ GRR + L G+ ++ ++ 
Sbjct: 3   LPAIADISHALGVSLAFASQTLSVFIFGFVLGPLLFGPLSDRIGRRPILLAGLVVFTIAG 62

Query: 92  LLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSGKMISYLNGAICFIPAL 151
           +    AQ I  +L AR LQG  A A +    A VRD F   ++ K+ S+L       P +
Sbjct: 63  IACTFAQDINLLLSARFLQGCAAGAAATLPIAIVRDQFEGVQARKLQSHLALVNNLAPLI 122

Query: 152 APILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMGSRPAVFKLSRYAAVLK 211
           AP+LGS +     WR  ++ +    +++ L       E+     S  A   L+ Y +VLK
Sbjct: 123 APLLGSAILVVGNWRWIYAALAVCGVILWLRAQTSFDETATRKSSNAAASLLTSYLSVLK 182

Query: 212 APTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTFWFGVNAVINIIACMTAPK 271
           +  FL    +     A + AY+ ++P++ M  L ++   F   F + A+  I       +
Sbjct: 183 SRRFLVSTLIMAFNFAGMFAYIAASPLVFMNNLGMTSAGFAVLFALTAMGTIAGSWVNGR 242

Query: 272 VMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASALAFML---PVFLSSIGFAWILGAAAG 328
           ++        ++ G     +  SL LV+ +Q +     +    V +S++    ++  A  
Sbjct: 243 LIHAGFAEHRVLGGALLASLLISLGLVVESQLAIYPIYILTALVVMSNLCTGIVMPNATH 302

Query: 329 KALAPFGDKAGTAAALLGLFQMSG---SGLLVG 358
            AL      AG  AALL   QM G   + LL G
Sbjct: 303 SALEDLSITAGAGAALLRATQMLGGACASLLAG 335