Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., Multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  181 bits (458), Expect = 4e-50
 Identities = 121/364 (33%), Positives = 187/364 (51%), Gaps = 6/364 (1%)

Query: 14  MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADK 73
           +++L  L  F PLAID YLPA P ++ AF  +    Q T+  +   + +GQL  GP+AD+
Sbjct: 6   ILILGALSAFGPLAIDFYLPAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYGPVADR 65

Query: 74  YGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQR 133
           +GRR   L G+ ++ L++L    A S+EW++ AR +Q LG CA  V + A V D      
Sbjct: 66  FGRRIPLLTGVGLFTLASLACAYAPSLEWLIGARFVQALGGCAGMVISRAVVSDKCDAVG 125

Query: 134 SGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNP- 192
           S K+ S L   +   P LAP+LG  L    GW++ F  +T F+ L   A+AL L ES P 
Sbjct: 126 SAKVFSQLMLVMGLAPILAPMLGGLLVNLHGWQSIFIALTLFSALASTAVALWLPESLPD 185

Query: 193 YMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFT 252
           Y+  +P    L +Y  +L    FL HA    +A+A + AY+  +P + ++   +    F 
Sbjct: 186 YVPRQPLSGALRQYGRLLTDAVFLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHFG 245

Query: 253 FWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAG-SLMLVLRNQASAL-AFML 310
           + FG NA   I+      +++ K G  + L   +   + AG SL+ V   Q + L   ++
Sbjct: 246 WLFGTNAAGFILVAQVNARLLSKRGPAFLLSRAVWVYLGAGLSLLAVSSLQPAQLWPLLV 305

Query: 311 PVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMS---GSGLLVGTLQRIMPEP 367
           P+F+       IL  A+  A+   G +AG+A+A+LG  Q S   G+  LV  L      P
Sbjct: 306 PLFICIASLGCILPNASACAMNGQGARAGSASAMLGCLQFSVAAGAASLVAALHDGTAVP 365

Query: 368 QLLI 371
             L+
Sbjct: 366 MALV 369