Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., multidrug resistance transporter, Bcr/CflA family from Pseudomonas fluorescens FW300-N2E2

 Score =  160 bits (406), Expect = 5e-44
 Identities = 114/379 (30%), Positives = 180/379 (47%), Gaps = 10/379 (2%)

Query: 14  MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADK 73
           + LL  L   S L+ +I LPA  +I +   V       T++ F     +GQL  GPLAD+
Sbjct: 26  VALLAGLAAISMLSTNIILPAFAEIGKDLGVTARELGLTLSSFFITFALGQLVVGPLADR 85

Query: 74  YGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQR 133
           YGR+ + LGG+S++ +  ++A  A +++ ++  R++Q LG CA SV + A  RDLF  + 
Sbjct: 86  YGRQKLVLGGLSVFVVGTVIAGLATTLDVLIAGRVVQALGVCAASVLSRAIARDLFEGET 145

Query: 134 SGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPY 193
             + +S    A    P  +P+ GS L+   GWRA F  +   A+++       L E++P 
Sbjct: 146 LARALSLTMIATAAAPGFSPLAGSVLSVTLGWRAIFILVGLAAVVLAFFYVRDLGETHPA 205

Query: 194 MGSRPAVFK--LSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEF 251
               P   K  +  Y  +     F+  A    L M+ + A   +AP ILM+ + L+  + 
Sbjct: 206 DRRAPHSAKSVVLAYGRLALDKRFILPALSMSLLMSGLFASFAAAPAILMQGIGLTSLQT 265

Query: 252 TFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASALAFMLP 311
             +F     +   A M AP++  + G R + ++GI   M  G L+LV    A  L +   
Sbjct: 266 GLYFAATVFVVFAAGMAAPRLAHRHGARIATLVGIACAMAGGGLLLV-GPAAPGLGWYA- 323

Query: 312 VFLSSIGFAWILGAA----AGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMPEP 367
             LS I F W +G A        + PFG +AG A+ALLG   M  + L       +   P
Sbjct: 324 --LSMITFLWGMGLANPLGTAITMGPFGKEAGMASALLGFLSMGAAALSTWLASVLSFAP 381

Query: 368 QLLIGLTMWLAAPALLILF 386
              +G    +A    L+LF
Sbjct: 382 VTTLGGIQTMACLVALVLF 400