Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., MFS transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  178 bits (451), Expect = 3e-49
 Identities = 118/364 (32%), Positives = 187/364 (51%), Gaps = 6/364 (1%)

Query: 14  MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADK 73
           +++L  L  F PLAID YLPA P ++ AF  +    Q T+  +   + +GQL  GP+AD+
Sbjct: 6   ILILGALSAFGPLAIDFYLPAFPAMATAFGTDEKHIQLTLAAYFLGLSIGQLAYGPVADR 65

Query: 74  YGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQR 133
           +GRR   L G+ ++ L++L    A ++EW++ AR +Q LG CA  V + A V D      
Sbjct: 66  FGRRIPLLTGVGLFTLASLACAYAPNLEWLIGARFVQALGGCAGMVISRAVVSDKCDAVG 125

Query: 134 SGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNP- 192
           S K+ S L   +   P LAP+LG  L    GW++ F  +T F+ L   A+AL L ES P 
Sbjct: 126 SAKVFSQLMLVMGLAPILAPMLGGLLVNLHGWQSIFIALTVFSALASTAVALWLPESLPD 185

Query: 193 YMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFT 252
           ++  +P    L +Y  +L    +L HA    +A+A + AY+  +P + ++   +    F 
Sbjct: 186 HVPRQPLSGALRQYGRLLTDSVYLGHALTGGIAIAGMFAYIAGSPFVFIKLYGVPAEHFG 245

Query: 253 FWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAG-SLMLVLRNQASAL-AFML 310
           + FG NA   I+      +++ K G  + L   +   + AG SL+ V   Q + L   ++
Sbjct: 246 WLFGTNAAGFILVAQVNARLLSKRGPAFLLSRAVWVYLGAGLSLLAVSSLQPAQLWPLLV 305

Query: 311 PVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMS---GSGLLVGTLQRIMPEP 367
           P+F+       IL  A+  A+   G +AG+A+A+LG  Q S   G+  LV  L      P
Sbjct: 306 PLFICIASLGCILPNASACAMNGQGARAGSASAMLGCLQFSVAAGAAALVAALHNGTAVP 365

Query: 368 QLLI 371
             L+
Sbjct: 366 MALV 369