Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 398 a.a., Drug resistance transporter Bcr/CflA subfamily from Pseudomonas syringae pv. syringae B728a

 Score =  168 bits (426), Expect = 2e-46
 Identities = 118/370 (31%), Positives = 186/370 (50%), Gaps = 13/370 (3%)

Query: 14  MVLLTLLVL-----FSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAG 68
           M L T+L+L     F PLAID YLP  P ++  F  +    Q T+  +   + +GQL  G
Sbjct: 1   MNLRTILILGSLSAFGPLAIDFYLPGFPAMASYFGTDEKHVQLTLAAYFLGLSLGQLAYG 60

Query: 69  PLADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDL 128
           P+AD++GRR   L G++++ L+++    A S+EW++ AR +Q LG CA  V + A V D 
Sbjct: 61  PVADRFGRRIPLLVGVTLFMLASVACAFAPSLEWLIAARFVQALGGCAGMVLSRAIVSDK 120

Query: 129 FGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQ 188
                S K+ S L   +   P LAP+LG  L   FGW++ F  +  F+     A+AL L 
Sbjct: 121 CNAVESAKVFSQLMLVMGLAPILAPMLGGVLVSTFGWQSIFVSLALFSGACLAAVALGLP 180

Query: 189 ESNPYMGSR-PAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLS 247
           ES P    R P    L +Y  + K   F+ HA    +AMA + AYV  +P + ++   + 
Sbjct: 181 ESMPATTPRQPLSGALGQYLNLFKDGVFIGHALTGGIAMAGMFAYVAGSPFVFIKLYGVP 240

Query: 248 MNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLV---LRNQAS 304
              + + FG+NA   I+      +++ K G  + L   +   + AG ++L    LR +A 
Sbjct: 241 AEHYGWLFGMNAAGFILVAQINARILRKTGPAFLLSRTVWIYLAAGLVLLAISGLRTEA- 299

Query: 305 ALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGL---LVGTLQ 361
               ++P+F+       I+  A+  A+     +AG+A+ALLG  Q S + +   LVG L 
Sbjct: 300 LWPLLVPLFICVASLGCIIPNASACAMNGQWARAGSASALLGCLQFSVAAVAASLVGVLH 359

Query: 362 RIMPEPQLLI 371
                P  L+
Sbjct: 360 DGTATPMALV 369



 Score = 23.9 bits (50), Expect = 0.009
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)

Query: 347 LFQMSGSG-LLVGTLQ-RIMPE--PQLLIGLTMWLAAPALLILFSPLGFRWHA 395
           LF M+ +G +LV  +  RI+ +  P  L+  T+W+   A L+L +  G R  A
Sbjct: 247 LFGMNAAGFILVAQINARILRKTGPAFLLSRTVWIYLAAGLVLLAISGLRTEA 299