Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  145 bits (367), Expect = 2e-39
 Identities = 103/374 (27%), Positives = 186/374 (49%), Gaps = 22/374 (5%)

Query: 11  KQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPL 70
           ++  ++   LV   P+++ +Y PA+P++ +AF    A  + T++ +       QL +G L
Sbjct: 8   RRTSIIGAFLVALGPISMALYTPAMPELVRAFASSEAAIKMTLSLYFGGFAFAQLVSGTL 67

Query: 71  ADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFG 130
           +D  GRR   L  ++IY   +L+A  A SI  +L  RL+QG+GA      A A VRD F 
Sbjct: 68  SDVIGRRRTTLIFMAIYLAGSLMAAFAPSIPVLLAGRLVQGIGASVGMTVARAIVRDQFT 127

Query: 131 PQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQES 190
              + ++++ +   +   PA++P LGS     FGW++ F  M GFAL+    + L + E+
Sbjct: 128 GTTAARIMNMIGMMLALGPAVSPTLGSIALGLFGWQSIFLLMVGFALMACFIVQLFMAET 187

Query: 191 NPYMGS----RPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQL 246
                S    RP    L+ Y  +++   F+    +   A+  + A+ T  P +L+ ++ L
Sbjct: 188 TTPDRSKGHFRPI---LAAYGELMRDGRFVSSTLVIAGAVGALYAWATMLPFVLISQVGL 244

Query: 247 SMNEF--------TFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLV 298
           +  EF          +F     + ++     P+ +   G      IG  +L +A ++  +
Sbjct: 245 TPTEFGIGMLMQSGLFFSGTVTMRLMMRRFTPQALVPAGL---FFIGAASLALAFTMHAL 301

Query: 299 LRNQASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVG 358
              + + L+ M P+ + + G A+++      A+APF   AGTA+A++G  QMS +GLL G
Sbjct: 302 ---EPTFLSVMTPIGIYAFGIAFVMPYMMTAAMAPFPHIAGTASAMMGFIQMS-AGLLGG 357

Query: 359 TLQRIMPEPQLLIG 372
            L  ++  P + +G
Sbjct: 358 ALAALVGVPAMALG 371