Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., transporter from Sinorhizobium meliloti 1021

 Score =  122 bits (306), Expect = 2e-32
 Identities = 104/356 (29%), Positives = 161/356 (45%), Gaps = 8/356 (2%)

Query: 14  MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHAL-AQDTITWFLFAMGVGQLFAGPLAD 72
           +V + ++     LAID  LPALP I Q   V +A   Q  I  F    G+ Q+F G L+D
Sbjct: 7   IVTIAVMTASIALAIDSMLPALPSIGQTLDVANANDTQLVIGVFFLGFGLSQIFFGSLSD 66

Query: 73  KYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQ 132
            +GRR+V LGG+++++LS   A   +SIE +L+ R +QG+G  A  +   A VRD FG +
Sbjct: 67  AFGRRSVLLGGLALFSLSMFAASWVESIETLLLLRFIQGIGGAAVRITTMAIVRDCFGGR 126

Query: 133 RSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNP 192
              +++SY+      +P +AP LG  +     W   F  +      + +    R++ES P
Sbjct: 127 DMARVMSYVMIVFMIVPIVAPTLGQVVIAYADWHWIFILIGVVGAALFVWALTRMKESLP 186

Query: 193 YMGSRPAVF--KLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNE 250
                P      LS +  VL       +     L  AVI AYV S   +  E   LS + 
Sbjct: 187 KEERLPLSVGAVLSGFRTVLTNRITCGYMIGMTLFTAVICAYVVSVQQVFGEVYNLS-DW 245

Query: 251 FTFWFGVNAVINIIACMTAPKVMDKLGTR---WSLIIGITTLMIAGSLMLVLRNQASALA 307
               F   A    +A       +   G R    + +I  T     G ++ +    A A++
Sbjct: 246 MPIAFAGTAGGIAVANFANGYFVRSFGMRRISHAAMILFTLFAAIGYVLSLAGTPAFAIS 305

Query: 308 FMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRI 363
           ++L   L  + FA I       +L P G  AGTA A+ G    +G  L+ G + ++
Sbjct: 306 YLL-FSLLLMFFAVIATNFTAISLEPMGHLAGTATAVTGFVSTTGGALIGGAVGQL 360