Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 400 a.a., drug resistance transporter, Bcr/CflA family protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  331 bits (848), Expect = 3e-95
 Identities = 182/398 (45%), Positives = 254/398 (63%), Gaps = 8/398 (2%)

Query: 9   VSKQQMVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAG 68
           + +  + +L  LVL SPLAIDIYLP++P ++  F V+    Q T+  FLFAMGVGQ+  G
Sbjct: 1   MQRNLLPILMSLVLLSPLAIDIYLPSMPAMALDFSVDERQVQSTLVLFLFAMGVGQVLIG 60

Query: 69  PLADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDL 128
           PLAD+YGRR VAL G  +Y +S+LLA +A   E + +ARLLQGL AC+TS+ AF+ VRD 
Sbjct: 61  PLADRYGRRPVALFGTVLYVISSLLAMAALEFELLQLARLLQGLAACSTSIVAFSAVRDS 120

Query: 129 FGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQ 188
           +    S ++ SYLNGAIC IPALAP LG  L  QFGWR+ F+FM  + L++ L +  RL 
Sbjct: 121 YSSADSARIYSYLNGAICVIPALAPTLGGLLAIQFGWRSTFAFMAFYGLVMLLVVGYRLP 180

Query: 189 ESNP-YMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLS 247
           E+ P +  S   +++  RYA VLK   F+F+A  C+ AMA IL YV+ + + L+ +L +S
Sbjct: 181 ETRPAHTESAGPLYRWGRYAPVLKNSHFMFYAVTCMAAMAAILCYVSYSSIWLIGKLGVS 240

Query: 248 MNEFTFWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLR------N 301
              F+  FG+NAV+N++AC  AP V+ KLG R ++++ +  +++A  L LVL+       
Sbjct: 241 ELAFSGLFGLNAVVNVVACFAAPVVIRKLGNRPTVLVALGLMILASVLELVLQLPAWASP 300

Query: 302 QASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQ 361
            A++ AFMLP+ L  +GFA++LG A   ALAPFG++AGTA ALLG  QMSG+ ++   +Q
Sbjct: 301 MAASFAFMLPMMLLCVGFAFLLGPATSMALAPFGERAGTATALLGFIQMSGASVITALVQ 360

Query: 362 RIMPEPQLLIGLTM-WLAAPALLILFSPLGFRWHASVS 398
                    IG TM  LA   L I+  P    WH   S
Sbjct: 361 LTPMTAPYAIGYTMGGLALVLLAIMLMPRFGHWHQEPS 398