Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., multidrug effflux MFS transporter from Pseudomonas fluorescens SBW25-INTG

 Score =  162 bits (411), Expect = 1e-44
 Identities = 123/388 (31%), Positives = 192/388 (49%), Gaps = 25/388 (6%)

Query: 15  VLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKY 74
           +LL L+    P AIDIYLPALP +  +     AL Q ++T F   +GV QLF GP++D +
Sbjct: 10  LLLGLITAVGPFAIDIYLPALPTLGASLQASPALVQMSLTVFFVIIGVCQLFYGPISDVF 69

Query: 75  GRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRS 134
           GR+     G+ I+A++++    A +IE ++  R LQ  GACA  V   A VRDL+    +
Sbjct: 70  GRKPPIYAGLVIFAVASVGCALAPTIESLIAFRALQAFGACAGMVIPRAIVRDLYTGHEA 129

Query: 135 GKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYM 194
            K+++ L   +   P LAP+ GS +   + WR  F+ +   A+   +   ++L E++P  
Sbjct: 130 AKLMALLMLVMSVSPILAPLAGSLVIALWSWREVFAVLAVVAVACLVMTIVQLPETHPAE 189

Query: 195 G--SRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFT 252
               +      S Y A+L+ P F+  + +C   +A    ++ SAP + +E   L+  +F+
Sbjct: 190 RRLGKTLGNAFSSYGALLRDPVFIGLSVVCGFGLATFFVFIGSAPFVYIEHYGLTPTQFS 249

Query: 253 FWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQA--------- 303
             F +NA             M +L  R S   G+  L I GS++ V    A         
Sbjct: 250 LGFALNAASFF--------AMSQLTARLSARFGLAPL-IRGSVVAVAAVMAVLATTTLWV 300

Query: 304 SALAFMLPVFLSSIGFAWILGAAAG-KALAPFGDKAGTAAALLGLFQM---SGSGLLVGT 359
            +LA M+ +     GF  +L  AAG  +L   G  AG+A+ALLG  QM   + S  LVG 
Sbjct: 301 DSLALMMTMLFIGFGFLGLLLPAAGVLSLEDHGAVAGSASALLGAIQMITAAVSMTLVGV 360

Query: 360 LQRIMPEPQLLIGLTMWLAAPALLILFS 387
                P P +LIG+ +   A  L  L++
Sbjct: 361 FADHTPAP-MLIGIALCGIAAMLTTLWT 387