Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 403 a.a., putative bicyclomycin resistance protein from Phaeobacter inhibens DSM 17395

 Score =  129 bits (323), Expect = 2e-34
 Identities = 94/342 (27%), Positives = 167/342 (48%), Gaps = 5/342 (1%)

Query: 17  LTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYGR 76
           L LL   S LA++I+LP+LP +++ F  +++L Q ++  +L    + Q+F GP++DK GR
Sbjct: 20  LILLSGLSALAMNIFLPSLPGMARYFDADYSLMQLSVALYLAVSAIVQIFVGPISDKLGR 79

Query: 77  RTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSGK 136
           R V L G++++ L+ L    A S E  L+ R+ Q + A A  V + A VRD++   ++  
Sbjct: 80  RPVILWGVALFLLATLGCLYAPSAEIFLLFRMCQAIVASA-MVLSRAAVRDIYDSDQAAS 138

Query: 137 MISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMGS 196
           MI Y+   +  +P + P++G  L +  GW+ANF  +            L L E+    G 
Sbjct: 139 MIGYVTMGMAVVPMIGPMIGGALEETIGWKANFWLLMALGAGTFAIAYLDLGETARKSG- 197

Query: 197 RPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTFWFG 256
           +  + +   Y  +L++P F  ++    L+     AY+  AP +  +   LS  +   +F 
Sbjct: 198 KTLMAQFREYPELLRSPRFWGYSLASGLSSGAFFAYLGGAPFMGTQVYGLSAAQLGVYFA 257

Query: 257 VNAVINIIACMTAPKVMDKLGTRWSLIIG--ITTLMIAGSLMLVLRNQASALAFMLPVFL 314
             AV   +    + +   ++G    ++ G  I  + +A SL+L L    S  +F   +  
Sbjct: 258 SPAVGYFVGNFLSGRYSVRIGLNQMVLWGCLINGVGVALSLVLALLGADSVYSFFGFMTF 317

Query: 315 SSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMS-GSGL 355
             +G    +  A   A++     AGTA+ L G   +  G+GL
Sbjct: 318 VGLGNGMAIPNATAGAISVRPHLAGTASGLAGAIMIGVGAGL 359