Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., putative MFS transporter from Phaeobacter inhibens DSM 17395

 Score =  153 bits (387), Expect = 8e-42
 Identities = 114/369 (30%), Positives = 187/369 (50%), Gaps = 38/369 (10%)

Query: 1   MKQAMPSQVSKQQMVLLTLLVLFSPLA--IDIYLPALPQISQAFHVEHA-LAQDTITWFL 57
           M + +   +SK + + L + ++F+ +A  ID  LPALP+I Q    ++   AQ  I  F 
Sbjct: 1   MTKDIQISMSKAEFIAL-IAMMFATVAFSIDAMLPALPEIGQTLSADNPNRAQLVIATFA 59

Query: 58  FAMGVGQLFAGPLADKYGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACAT 117
             MG+G  F GPL+D +GRR+V      +Y  +ALLA+++ SIE +L++R++ GL A   
Sbjct: 60  LGMGIGTFFTGPLSDAFGRRSVIFAAAGLYIAAALLAYASSSIEMLLLSRVVMGLAAAGP 119

Query: 118 SVAAFATVRDLFGPQRSGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFAL 177
            V A A VRDL+  +   +M+S        +PA+AP++G+ +     WRA F     FA+
Sbjct: 120 RVVALAIVRDLYSGREMARMMSIAMLIFTLVPAIAPMMGAGIILLTSWRAIFLAFALFAV 179

Query: 178 LVGLAMALRLQESNPYMGSRPAVFKLSRYAA----VLKAPTFLFHASLCLLAMAVILAYV 233
           ++ L M LRL E  P    RP  F+L    A    +L+ PT      +    +A++   +
Sbjct: 180 VIVLWMGLRLPEPLPAENRRP--FRLPNLQAALIEMLRHPTVRLSMMVQCFCLAMLFCMI 237

Query: 234 TSA-PV--ILMERLQLSMNEFTFWFGVNAVINIIACMTAPKVMDKLGTR----W------ 280
           T   P+  ++ +R     + F FWFG  AV++  + +    ++ +LG R    W      
Sbjct: 238 TLVQPIYDVVFDR----ADSFPFWFGFIAVMSGSSSLINASLVVRLGMRRMVTWALAGQI 293

Query: 281 ---SLIIGITTLMIAGSLMLVLRNQASALAFMLPVFLSSIGFAWILGAAAGKALAPFGDK 337
              +L++G+  L ++G LM  L      +A+   VF  +      LG     A+ P G  
Sbjct: 294 IFSALMLGLEVLPLSGDLMFAL-----FVAWQTSVFFMA---GLTLGNLNAMAMEPMGHI 345

Query: 338 AGTAAALLG 346
           AG AA+++G
Sbjct: 346 AGMAASIVG 354