Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 394 a.a., multidrug transporter EmrD from Klebsiella michiganensis M5al

 Score =  144 bits (363), Expect = 4e-39
 Identities = 113/385 (29%), Positives = 179/385 (46%), Gaps = 10/385 (2%)

Query: 14  MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADK 73
           +++L LLV    +A  IY+PA+  ++ + +V     Q  +  +L   GV QLF GPL+D+
Sbjct: 10  LLMLVLLVAVGQMAQTIYIPAIADMAVSLNVREGAVQSVMAAYLLTYGVSQLFYGPLSDR 69

Query: 74  YGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQR 133
            GRR V L G+SI+ L+ L+A +  S+  ++ A  +QG+G     V A    RDL+   +
Sbjct: 70  VGRRPVILVGMSIFMLATLVAITTHSLPVLIAASAMQGMGTGVGGVMARTLPRDLYEGAQ 129

Query: 134 SGKMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPY 193
                S LN  I   P LAP++G  L   + WRA F F+      V  +MA  + E+ P 
Sbjct: 130 LRHANSLLNMGILVSPLLAPLIGGILDTLWNWRACFVFLLVLCAGVTFSMARWMPETRP- 188

Query: 194 MGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTF 253
               P    ++ Y  +     F  +  + +  +A I  +   + V++   L LS    + 
Sbjct: 189 -TGAPRTRLITNYKTLFGTGAFNCYLLMLIGGLAGIAVFEACSGVLMGAVLGLSSMSVSI 247

Query: 254 WFGVNAVINIIACMTAPKVMDKLGT-RWSLIIGITTLMIAGSLMLV--LRNQASALAFML 310
            F +           A +   +  T  W  +I     ++AG LM +  L    +    ++
Sbjct: 248 LFILPIPAAFFGAWFAGRPNKRFPTLMWQSVI---CCLLAGVLMWIPGLLGVMTVWTLLV 304

Query: 311 PVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMPEP-QL 369
           P  L   G   +   A   A+ PF   AGTA AL+G  Q  GSG+L   L  +MP+  Q 
Sbjct: 305 PAALFFFGAGMLFPLATSGAMEPFPFLAGTAGALVGGLQNIGSGVL-AWLSAMMPQTGQG 363

Query: 370 LIGLTMWLAAPALLILFSPLGFRWH 394
            +GL M L    +L+ + PL  R+H
Sbjct: 364 SLGLLMMLMGLLILLCWLPLASRFH 388