Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., multidrug transporter subunit MdtL from Klebsiella michiganensis M5al

 Score =  177 bits (450), Expect = 4e-49
 Identities = 113/367 (30%), Positives = 190/367 (51%), Gaps = 6/367 (1%)

Query: 20  LVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYGRRTV 79
           LVL  P  ID+YL  LP+I+Q      A      + +L  M    LFAG +ADK GR+ V
Sbjct: 11  LVLLYPSGIDMYLVGLPRIAQDLGASEAQLHIAFSVYLAGMAAAMLFAGRIADKSGRKPV 70

Query: 80  ALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSGKMIS 139
           A+ G  ++ L++L+   AQ     L  R +QG+GA +  V AFA +RD    +R  K++S
Sbjct: 71  AIFGAVVFILASLICSQAQVSAHFLTGRFIQGIGAGSCYVVAFAVLRDTLDDRRRAKVLS 130

Query: 140 YLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNPYMGSRPA 199
            LNG  C IP LAP+LG  +  ++ W++ F  MTG  +LVGL     L+E+ P    + A
Sbjct: 131 LLNGITCIIPVLAPVLGHLIMLKYPWQSLFYTMTGMGVLVGLLSIFILRETRPTSVRQAA 190

Query: 200 VFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTFWFGVNA 259
              ++  + + +   FL    +  L++  IL YV  +PV++ME +      ++    + A
Sbjct: 191 QQNVAPESLLNR--FFLSRTIVTTLSVTAILTYVNVSPVLMMEVMGFDRGTYSMAMALMA 248

Query: 260 VINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLRNQASALAFMLPVFLSSIGF 319
           +++++   + P  +     R  ++       IAG+L+    +Q      ML + L   GF
Sbjct: 249 LVSMVVSFSTPFALTLFKPRTLMLTSQVLFFIAGALLSFATSQTIT---MLGLGLICAGF 305

Query: 320 AWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRI-MPEPQLLIGLTMWLA 378
           +   G A  +AL PF  +AG A+++LG+ Q+ GS L +     I +    +LIG+ +  +
Sbjct: 306 SAGFGVAMSQALGPFTLRAGVASSVLGIAQVCGSSLWIWLAAIIGLSAMNMLIGILIACS 365

Query: 379 APALLIL 385
             +++++
Sbjct: 366 IVSIVLI 372