Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  328 bits (841), Expect = 2e-94
 Identities = 178/388 (45%), Positives = 251/388 (64%), Gaps = 10/388 (2%)

Query: 16  LLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADKYG 75
           +L  LVL SPLAIDIYLP++P ++  F V  +  Q T+  FLFAMGVGQ+  GPLAD+YG
Sbjct: 8   ILMSLVLLSPLAIDIYLPSMPTMAAEFAVSASEVQSTLVLFLFAMGVGQILIGPLADRYG 67

Query: 76  RRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQRSG 135
           RR VAL G+ +Y  S+LLA +A    W+ +AR+LQGL AC+TS+  F+ VRD + P+   
Sbjct: 68  RRPVALFGVLLYGASSLLAAAAIEFHWLQLARVLQGLAACSTSIVVFSAVRDCYSPKEGA 127

Query: 136 KMISYLNGAICFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNP--Y 193
           ++ SYLNGAIC IPALAP LG  L  QFGWR+ F FMT +A+L+ L +  RL E+ P   
Sbjct: 128 RIYSYLNGAICVIPALAPTLGGLLAMQFGWRSTFVFMTLYAILMMLLVGYRLPETRPANT 187

Query: 194 MGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFTF 253
           + S P +++ SRY  VL    FLF+A  C+ AMA IL+YV+ +PV L+  L +S   F+ 
Sbjct: 188 VSSGP-LYRWSRYKPVLSNTHFLFYAFACMSAMAAILSYVSYSPVWLIGHLGVSELAFSG 246

Query: 254 WFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLR------NQASALA 307
            FG+NA++NI+AC  AP V+ KLG R + I+ +  L+++  L++  +        A+A A
Sbjct: 247 LFGLNALVNIVACFAAPVVIRKLGNRPTAILALVLLVLSAVLIIAAQAFGPSVGMAAAFA 306

Query: 308 FMLPVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMPEP 367
           FMLP+ L  IGFA++LG A   AL+ FG++AGTA A+LG  QMSG+ ++ G +Q+     
Sbjct: 307 FMLPMMLLCIGFAFLLGPATSMALSAFGERAGTATAMLGFIQMSGASVIAGLVQQTSLTA 366

Query: 368 QLLIGLTMWLAAPALLILFSPLGF-RWH 394
              + L M + +  LL + +   F  WH
Sbjct: 367 PYAVALVMGVFSVGLLSMMALSRFDHWH 394