Pairwise Alignments

Query, 400 a.a., Bcr/CflA family drug resistance efflux transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Bcr/CflA subfamily drug resistance transporter (RefSeq) from Shewanella sp. ANA-3

 Score =  196 bits (499), Expect = 8e-55
 Identities = 125/376 (33%), Positives = 196/376 (52%), Gaps = 6/376 (1%)

Query: 14  MVLLTLLVLFSPLAIDIYLPALPQISQAFHVEHALAQDTITWFLFAMGVGQLFAGPLADK 73
           ++LL    L + L +D+YLPA+  I Q+F V     Q T+T ++  +G+GQL  GPL+D 
Sbjct: 21  LLLLIPFDLLASLGMDLYLPAINDIRQSFSVSQGQMQLTLTLYMAILGLGQLLFGPLSDA 80

Query: 74  YGRRTVALGGISIYALSALLAWSAQSIEWMLMARLLQGLGACATSVAAFATVRDLFGPQR 133
            GRR V + G  +YA S+L      S    L+ R++Q L A A  VAAFATVRD+F  + 
Sbjct: 81  IGRRRVVIAGALVYAGSSLAMALTDSFSVFLLLRIVQALSASAVLVAAFATVRDVFADRE 140

Query: 134 SGKMISYLNGAI-CFIPALAPILGSWLTQQFGWRANFSFMTGFALLVGLAMALRLQESNP 192
            G +I  + G++   +P +AP +GS +   + WR  F  +  FA LVGL   L+  E+ P
Sbjct: 141 EGVVIYAIMGSVLAAVPVVAPFIGSLIDGLWHWRGIFYTLAIFAALVGLHALLKWPETRP 200

Query: 193 YMGSRPAVFKLSRYAAVLKAPTFLFHASLCLLAMAVILAYVTSAPVILMERLQLSMNEFT 252
              ++   F+ SR   +++A  FL +      AM     Y +++P ILM++L L    F+
Sbjct: 201 ---AQTHPFEWSRCFNIIRAKAFLGYTLAYATAMGAFFVYFSASPSILMDKLGLDKVTFS 257

Query: 253 FWFGVNAVINIIACMTAPKVMDKLGTRWSLIIGITTLMIAGSLMLVLR--NQASALAFML 310
            WFG  A++ II       ++ + GT+ +++ G+  +M++  L+  L   N  S L FML
Sbjct: 258 LWFGSVAIVMIITTRFVKHLVKRWGTQGTVLRGLIGMMLSSGLLYGLEWLNGLSLLGFML 317

Query: 311 PVFLSSIGFAWILGAAAGKALAPFGDKAGTAAALLGLFQMSGSGLLVGTLQRIMPEPQLL 370
           P++   +  A      A  ALA F   AG A AL    +      LV  L  ++P    L
Sbjct: 318 PMYFIGVHIALTCAVTANGALAAFSHSAGLATALYYAIESLFLSALVSLLIWLLPSGTTL 377

Query: 371 IGLTMWLAAPALLILF 386
           +  +  L + +L +LF
Sbjct: 378 VICSYILISASLSLLF 393