Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., Transcriptional regulator, LysR family from Pseudomonas fluorescens FW300-N2E2

 Score =  139 bits (349), Expect = 1e-37
 Identities = 99/298 (33%), Positives = 140/298 (46%), Gaps = 12/298 (4%)

Query: 24  DLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNATPKA 83
           DLNLLV L VL+ E SV RAA RL LS SA+S++LA+LRE   DPL VR   GL  TP+A
Sbjct: 5   DLNLLVTLDVLLSEGSVARAARRLQLSPSAMSRALARLRETTGDPLLVRAGRGLVPTPRA 64

Query: 84  LFLKPKLDVLVNQLELLTQPAHFSPQSSEYR-FQIAAVESVYPLIMPYFLPTIFRHGPHL 142
           L L+ ++  LV Q + + +P          R F +   E          +  I    P +
Sbjct: 65  LELREQVSHLVQQAQAVLRPVTTPDLGRLSRTFTLRTREGFVENFAIDLITRIHEQAPGV 124

Query: 143 SISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCVVRR 202
            +     T++    L+ G +D      D D +          ++  Q ++ D    VVR 
Sbjct: 125 RLRFVEKTDRDSTTLREGTVDLETAVVDKDTS---------PELRTQALFSDRLIGVVRA 175

Query: 203 GHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAASLCT 262
           GHP+ Q   + + Y    HV V   G D  L+D  LA L   R+I  TVP F+SA  L  
Sbjct: 176 GHPLSQATVSAAGYAAGGHVGVSMRGLDHGLIDQALAALNLSREIVTTVPGFSSALGLAR 235

Query: 263 YTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLRELIQ 320
            +D I + P  +T   + ++ L    LP   P     + WH   + DP  RWLR  ++
Sbjct: 236 SSDLIASVPERYT--ASLRVGLHSFTLPFSVPGFTIAMLWHPRMDADPVHRWLRSCLR 291