Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 309 a.a., transcriptional regulator, LysR family from Pseudomonas syringae pv. syringae B728a

 Score =  132 bits (332), Expect = 1e-35
 Identities = 90/304 (29%), Positives = 152/304 (50%), Gaps = 18/304 (5%)

Query: 20  LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79
           L ++DLNL +    +  E ++TRA   + ++Q AVS +LA+LRE F+DPLFVRT+ G+  
Sbjct: 3   LNKVDLNLFIVFDAIYTEANLTRAGQIVGITQPAVSNALARLRETFNDPLFVRTAQGMVP 62

Query: 80  TPKALFLKPKLDVLVNQLELLTQPAH-FSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRH 138
           TP A  +   +   ++ L +  Q +  F+P  +   ++I+  +    +I+P     + R 
Sbjct: 63  TPMAQNIIGPVRNALSLLRVSVQESRIFNPLQANKNYRISMTDLTEAVILPALFQRLRRL 122

Query: 139 GPHLSISTH-AWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQR 197
            P ++I +  +   +T ++L  G LDF +        DA L   P   +   ++  D   
Sbjct: 123 APAVTIESFLSKRRETTKELAAGRLDFAV--------DAPLNTDP--QVRHVKLMEDRYV 172

Query: 198 CVVRRGHPVL-QYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNS 256
           C +R+GHP+  +    L  YL+  H+ +    +    +D  L  +G +R IA+    +  
Sbjct: 173 CGMRKGHPLANKATLTLDDYLSQSHIHISSRRSGLGHVDLALGKMGIQRRIALRSQHYMM 232

Query: 257 AASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYT-LFWHRERENDPALRWL 315
           A  +   TD + T P  F    A++ DL  + LP+   P   T L+WH   + DPA RW+
Sbjct: 233 ATQVLQQTDMVMTVPERF----ARRNDLHYVYLPVSDVPSVETHLYWHESTDQDPANRWM 288

Query: 316 RELI 319
           RE I
Sbjct: 289 REQI 292