Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., regulatory protein, LysR (RefSeq) from Shewanella amazonensis SB2B

 Score =  290 bits (742), Expect = 3e-83
 Identities = 149/309 (48%), Positives = 194/309 (62%), Gaps = 4/309 (1%)

Query: 15  MQIEKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTS 74
           MQ++KL RIDLNLLV L+VL+EE SVTRAA RL LSQSA+SKSL++LRE   DPLF RT+
Sbjct: 1   MQLDKLTRIDLNLLVVLQVLLEEQSVTRAAVRLNLSQSALSKSLSRLRETLGDPLFSRTA 60

Query: 75  YGLNATPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPT 134
           +GL  T  AL L  +L  ++  L  L  P  F P SS   F  A VES Y  ++P F+  
Sbjct: 61  HGLKPTAHALALAERLPGVLQALNQLVMPPSFDPASSTRTFSFAMVESAYETLIPGFIGP 120

Query: 135 IFRHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRD 194
           +    P L ++++ W E++   LQ+G++DFG+ G D+           P  IC Q +Y+D
Sbjct: 121 LLSMAPGLRLNSYVWNEKSISDLQLGQIDFGIDGIDLQPEANFRIDSLPEGICHQTLYQD 180

Query: 195 NQRCVVRRGHPVL----QYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAIT 250
            Q C+VR+GHP +    +  W+LS YL L HVQVRC+GND W LDY LA  G +R +  T
Sbjct: 181 QQICLVRKGHPAIALLGEGKWDLSRYLELAHVQVRCEGNDWWALDYYLATQGKQRHLCAT 240

Query: 251 VPDFNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDP 310
           VPDF  AAS+C  TD +FT P  F    +K   L  LPLP +F P+AY L WH+  + DP
Sbjct: 241 VPDFYGAASVCANTDLVFTLPQSFARHASKLYALEMLPLPFDFMPLAYVLLWHQRNDGDP 300

Query: 311 ALRWLRELI 319
             RW+RELI
Sbjct: 301 GHRWIRELI 309