Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  293 bits (750), Expect = 4e-84
 Identities = 146/309 (47%), Positives = 202/309 (65%), Gaps = 4/309 (1%)

Query: 15  MQIEKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTS 74
           M ++ LARIDLNLLV L+VL+EE SVTRAA+RL LSQSA+SKSL +LR+   DPLF+RT+
Sbjct: 1   MNLDNLARIDLNLLVMLQVLLEERSVTRAASRLHLSQSALSKSLNRLRDTLGDPLFIRTA 60

Query: 75  YGLNATPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPT 134
           +GL  T  A  L  +L  ++  L  LTQP  F+P SS  +F  A VES Y  ++PYF+  
Sbjct: 61  HGLKPTAHAALLGQQLPDMLQGLYQLTQPPSFNPASSRRQFSFAMVESAYETLIPYFIGP 120

Query: 135 IFRHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRD 194
           +  + P+L + ++ WTE++   LQ G++DFG+TG+DI+     +    P  I  Q ++ D
Sbjct: 121 LLNNAPNLRLDSYLWTEKSLSSLQKGQIDFGITGRDINPQSDLIIDRLPEGIAHQTLFTD 180

Query: 195 NQRCVVRRGHPVL----QYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAIT 250
           +Q C+VR+GHP+L     + W+L  YL + HVQVRC+GN+ W LDY LA  G  R ++ T
Sbjct: 181 HQVCLVRQGHPMLPAIRNHQWDLDIYLEMSHVQVRCEGNEWWALDYFLAKSGQRRHLSTT 240

Query: 251 VPDFNSAASLCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDP 310
           VPDF  AAS+C ++D IFT PS F     K   L ELPLP +F  +AY L WH   +++P
Sbjct: 241 VPDFYGAASVCAHSDLIFTLPSSFAAHARKLYALEELPLPFDFHSLAYVLLWHERNDDEP 300

Query: 311 ALRWLRELI 319
             +W+RE I
Sbjct: 301 GHKWIRETI 309