Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  248 bits (633), Expect = 1e-70
 Identities = 127/296 (42%), Positives = 181/296 (61%)

Query: 24  DLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNATPKA 83
           D NLL  L+VL+EE SVT AA RL LSQSAVSK L KLR+ FDD LF RT++GL  TPKA
Sbjct: 5   DFNLLPLLEVLLEEQSVTAAAERLHLSQSAVSKQLNKLRDSFDDQLFERTAHGLRPTPKA 64

Query: 84  LFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHGPHLS 143
             L P++  +++Q+  LT+P+ F P  S  RF++  VE+ Y L  P F+P + +  P ++
Sbjct: 65  KQLGPEIRQILSQVSSLTRPSDFDPSKSHRRFRLELVETAYSLTYPRFMPKLLKQAPKIT 124

Query: 144 ISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCVVRRG 203
           + +H W  ++  +L   + D G+  ++ D    +     P+ +   E+ RD+  C+VR G
Sbjct: 125 LDSHTWHSESMERLLRCDTDLGIACREWDERSLQHVNNLPSALRFVELTRDHSLCLVREG 184

Query: 204 HPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAASLCTY 263
           HP+LQ +WNLS++L  RH+QV   G   WLLD  L     +RDIA+ + DFNSA  LC  
Sbjct: 185 HPLLQEEWNLSTFLKYRHLQVTFGGISHWLLDDVLQMKHLKRDIAVNLTDFNSAMQLCEQ 244

Query: 264 TDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLRELI 319
           +D I  +P+ +   +  Q  LV LP+P +  P  Y L WH+  + DP+ RWLRELI
Sbjct: 245 SDLILCSPAKYAKVMMGQFKLVSLPIPTQMVPGTYLLLWHKHFDLDPSHRWLRELI 300