Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., hypothetical transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  174 bits (441), Expect = 2e-48
 Identities = 97/228 (42%), Positives = 135/228 (59%), Gaps = 4/228 (1%)

Query: 20  LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79
           L  +DLNLL  L++L+EE SVT AAARL LSQSAVSK L +LRE FDDPLF RT+YGL  
Sbjct: 2   LKHLDLNLLPVLEILLEEQSVTAAAARLHLSQSAVSKQLTRLREVFDDPLFERTAYGLKP 61

Query: 80  TPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHG 139
           TPKAL L P L   + QL   T+P  F P  S+ +F++  VE+ Y L  PYF+P++    
Sbjct: 62  TPKALSLAPDLRQCLQQLAQFTRPDSFEPALSQRQFRMHLVETTYSLTFPYFMPSLLVQA 121

Query: 140 PHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCV 199
           P +S++   W   T  +L   ++D  +  ++ D          P D+   E+ +D   C+
Sbjct: 122 PWVSLNCQTWRLDTMDRLLRCDIDLAIGCREWDERSPMHVNHIPDDLHYVELVQDYTVCL 181

Query: 200 VRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRL----ADLGY 243
           +RR HP L  +W+L ++L+ R +QV   G + WLLD  L    A+ GY
Sbjct: 182 MRRDHPALAQEWDLDTFLSYRQLQVAFGGLEHWLLDDVLQIARAETGY 229