Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  150 bits (378), Expect = 5e-41
 Identities = 92/313 (29%), Positives = 163/313 (52%), Gaps = 13/313 (4%)

Query: 18  EKLARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGL 77
           + L+R+DLNLL   ++L +E SV++AA +L ++ S VSKSLAKLR+ FDDPLF++T  GL
Sbjct: 3   KSLSRLDLNLLFTFQLLSQERSVSKAAKKLNVTPSTVSKSLAKLRDWFDDPLFIKTPQGL 62

Query: 78  NATPKALFLKPKL-DVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIF 136
             TP A  ++  L D L    +L+ +      +   +   + +  S+  +++      I+
Sbjct: 63  QLTPLAQSMEHDLADWLQMGKQLMGKRGDDMTKGLSFELMLESPLSL--IMLNQLTQAIY 120

Query: 137 RHGPHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQ 196
           +H P   +    W   +   +  GE D G TG++      +   L P  I  + ++ D  
Sbjct: 121 QHYPDAKVKVRNWDYDSLEAIIRGEADIGFTGRESHPRSKESLDLLPYFIDFEVLFTDLP 180

Query: 197 RCVVRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNS 256
           +  +RR HP LQ +W++ ++L   H+ +  + ++ W LD  L +LG  R+I +T+  F  
Sbjct: 181 QVYLRRNHPALQEEWSIDTFLKYPHINILWEKSETWALDDVLIELGLSRNIVLTLASFEQ 240

Query: 257 AASLCT--YTDFIFTAPSHFTHWVAKQM--DLVELPLPMEFP-----PMAYTLFWHRERE 307
           +  +    +   +  AP +   + A+Q+  DLV  P+P+         + +TL WH+   
Sbjct: 241 SLFVAAEPHHSMMAIAPQYCEQY-ARQLHPDLVTRPIPISGEYLNKLAIPFTLIWHKRNS 299

Query: 308 NDPALRWLRELIQ 320
           ++P + WLR  I+
Sbjct: 300 HNPKITWLRSKIK 312