Pairwise Alignments

Query, 327 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  242 bits (617), Expect = 1e-68
 Identities = 131/300 (43%), Positives = 180/300 (60%)

Query: 20  LARIDLNLLVCLKVLIEELSVTRAAARLCLSQSAVSKSLAKLREQFDDPLFVRTSYGLNA 79
           L  +DLNLL  L++L+EE SVT AAARL LSQSAVSK L +LRE FDDPLF RT+YGL  
Sbjct: 2   LKHLDLNLLPVLEILLEEQSVTAAAARLHLSQSAVSKQLTRLREVFDDPLFERTAYGLKP 61

Query: 80  TPKALFLKPKLDVLVNQLELLTQPAHFSPQSSEYRFQIAAVESVYPLIMPYFLPTIFRHG 139
           TPKAL L P L   + QL   T+P  F P  S+ +F++  VE+ Y L  P+F+P++    
Sbjct: 62  TPKALSLAPDLRQCLQQLAQFTRPDSFEPALSQRQFRMHLVETTYSLTFPHFMPSLLAQA 121

Query: 140 PHLSISTHAWTEQTFRKLQVGELDFGLTGKDIDINDAKLTLLPPADICEQEIYRDNQRCV 199
           P +SI+   W   T  +LQ  ++D  +  ++ D          P DI   E+ +D   C+
Sbjct: 122 PGVSINCQTWRLDTMDRLQRCDIDLAIGCREWDERSPMHVNHIPDDIHYVELVQDYTVCL 181

Query: 200 VRRGHPVLQYDWNLSSYLNLRHVQVRCDGNDRWLLDYRLADLGYERDIAITVPDFNSAAS 259
           +R  HP L  +W+L ++L+ R +QV   G + WLLD  L   G +RDIA+ + DF SA +
Sbjct: 182 MRSDHPALSQEWDLDTFLSYRQLQVAFGGLEYWLLDDVLQIQGRKRDIAVNMTDFQSALA 241

Query: 260 LCTYTDFIFTAPSHFTHWVAKQMDLVELPLPMEFPPMAYTLFWHRERENDPALRWLRELI 319
           LC  +D I  APS +   + K  DL  LP P++  P AY L WH+  E+D + +WLRELI
Sbjct: 242 LCEQSDLILCAPSRYALAMMKSFDLKYLPSPIKLIPGAYLLMWHKHFEHDLSHKWLRELI 301