Pairwise Alignments

Query, 440 a.a., thiamine phosphate synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., phosphomethylpyrimidine kinase/thiamin-phosphate pyrophosphorylase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  218 bits (554), Expect = 5e-61
 Identities = 133/298 (44%), Positives = 176/298 (59%), Gaps = 29/298 (9%)

Query: 125 NHRLNSKVNQHLAWVLATLTLDFSIGDGLCIARAAITQG-----------DSVSRETWPT 173
           NH     ++  +A VLA     F + D + +A+A + QG             ++R TWP 
Sbjct: 240 NHGSGCTLSSAIASVLA---FGFVLHDAIVVAKAYVNQGLTHARGLGHGPGPLARTTWPH 296

Query: 174 QFERFPAVQSNIRSLSTQVFLTTRAFPTIDKAKFNLYPVVDDVNWIEHLLKLGVRTVQLR 233
              ++P + +       Q +   R   T D     +YPVV+++  +E LL  GV+T+QLR
Sbjct: 297 SLLQYPKIVAVCADKQPQPYAFKRL--TTD---LGVYPVVNNLLLLEQLLAAGVKTIQLR 351

Query: 234 IKDPK---QGDLEAQIIRAIALGREFNAQVFINDHWQLAIKHQAYGVHLGQEDLTSANLT 290
           +K        +LEAQI  AIALG+ ++AQ+FINDHWQLAIKH A+GVHLGQEDL  A+L 
Sbjct: 352 VKSDAGITAAELEAQIQTAIALGKHYDAQLFINDHWQLAIKHGAFGVHLGQEDLAMADLN 411

Query: 291 ELLDAGIRLGLSTHGYYELLIAAGIQPSYIALGHIFPTTTKQMPSKPQGLVRLAAYQRLV 350
            +  AG+ LG+S+H Y+ELL A    PSYIALGHIFPTTTKQMPS PQGL +LA Y  L+
Sbjct: 412 AIHGAGLALGISSHSYFELLRAHQHAPSYIALGHIFPTTTKQMPSAPQGLFKLAHYVELL 471

Query: 351 NQMPYQGQHGIPTVAIGGIDCRNIRDVLDCGVTAVAVVRAITESPDPSLAVQALSSAF 408
                      P VAIGGI   N+  V   GV  +AVVRAITE+ DP  A+  L+ A+
Sbjct: 472 KAY-------YPLVAIGGIGPSNLDQVNATGVRNIAVVRAITEADDPIAALAELTRAW 522